| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5016 |
|---|
| Symbol | |
|---|
| ID | 8329214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 5975219 |
|---|
| End bp | 5976625 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644945453 |
|---|
| Product | putative transcriptional regulator, Crp/Fnr family |
|---|
| Protein accession | YP_003102685 |
|---|
| Protein GI | 256379025 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.405793 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCTGTCA CCGATCAGGG CGTGGAATCC GAGCGCCCTC AGCTGAGCCT CGGCACTGCG
GCTGCCCGCA ACCTCGCGAC CACCACCAAG TCCGCCCCGC AGATGCAGAA CATCACCTCG
CGGTGGCTGC TCAAGGTCCT GCCGTGGGAG CAGGCGGCCG GTGGCGCGTT CCGGGTCAAC
CGCAGGCTCA GCTACGCGGT CGGCGACGGC AGGCTGACCT TCACCAACAC CGGCGCCGCC
GTGCAGGTCG TGCCGCAGGA GCTGTGCGAG CTGCCGCTGC TGCGCGGGTT CGAGGACGTG
GCCGTGCTGG CCGCGCTCGC CTCCCGCTTC AAGCAGCGCG AGTTCGCCGC GGGCGAGGTC
GTCGTGGAGC GCGGGCGCAC CCAGGACGCC GTGCACCTGG TCGCGCACGG CCGGGTCAAC
AAGATCGGCG AGACCGAGTA CGGCGACCAG ACCGTGCTCG GCGTGCTCGC CGACGGCGAC
CACTTCGGCG GCCAGTGCCT GGCCGGTCCG CAGGGCGTCT GGGACTTCAC CGTCAAGGCG
ATCACCCCGG TCACCATGCT GGTGCTGCCG TGGAGCGTGT TCGAGCAGCT CAACGGCGAG
ATGGGCGGCC TGCGGGCGCA CATCCAGCGG ATGGTCAACG CCGGTCGCCA GAAGCAGAAC
CACCACGGCG AGGCCGAGAT CGACATCGCC TCGGGCCACG AGGGCGAGGC CCCGCTCCCC
GGCACGTTCG TGGACTACGA GCTGGCGCCG CGCGAGTACG AGCTGAGCGT CGCGCAGACC
GTCCTCAACA TCCACACCCG CGTCGCGGAC CTCTACAACG AGCCGATGGA CCAGGTCGAG
CAGCAGCTGC GGCTCACCAT CGAGGCGCTG CGCGAGCGCC AGGAGCACGA GCTGGTCAAC
AACCGCGACT TCGGCCTGCT GCACAACTCC GACCTCGGCC AGCGCATCCA CACCCGCTCC
GGCCCGCCCA CCCCGGACGA CTTCGACGAG CTGCTGTCCC TGGTGTGGAA GCAGCCGACC
GCGTTCCTGG CGCACCCCAA GGTGATCGCC GCGTTCGGCC GCGAGTGCAC CAAGCGCGGG
ATCTACCCGC AGAACACCGA CCTGAACGGG CACATGGTGC CCGCGTGGCG CGGCGTGCCG
GTGCTGCCCT GCAACAAGAT CGGCGTCAGC GACCAGCGCA CCAGCTCGGT GATCCTGCTG
CGCGCGGGCA AGGACAACCA GGGCGTGATC GGCCTGCACC AGACCGGCCT GCCCGACGAG
TACCAGCCCG GCCTGAACGT GCGGTTCATG GGCATCAACG AGCGCGCGGT CATGTCGTAC
CTGGTCAGCA CGTACTACTC CGCCGCGATC ATGGTCCCCG ACGCCGTCGG CGTGCTGGAG
CACGTCGAGC TGGGCCGCGA GGACTGA
|
|---|
| Protein sequence | MSVTDQGVES ERPQLSLGTA AARNLATTTK SAPQMQNITS RWLLKVLPWE QAAGGAFRVN
RRLSYAVGDG RLTFTNTGAA VQVVPQELCE LPLLRGFEDV AVLAALASRF KQREFAAGEV
VVERGRTQDA VHLVAHGRVN KIGETEYGDQ TVLGVLADGD HFGGQCLAGP QGVWDFTVKA
ITPVTMLVLP WSVFEQLNGE MGGLRAHIQR MVNAGRQKQN HHGEAEIDIA SGHEGEAPLP
GTFVDYELAP REYELSVAQT VLNIHTRVAD LYNEPMDQVE QQLRLTIEAL RERQEHELVN
NRDFGLLHNS DLGQRIHTRS GPPTPDDFDE LLSLVWKQPT AFLAHPKVIA AFGRECTKRG
IYPQNTDLNG HMVPAWRGVP VLPCNKIGVS DQRTSSVILL RAGKDNQGVI GLHQTGLPDE
YQPGLNVRFM GINERAVMSY LVSTYYSAAI MVPDAVGVLE HVELGRED
|
|---|
| |