Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4920 |
Symbol | |
ID | 8329118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 5867297 |
End bp | 5868397 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644945360 |
Product | cobalamin B12-binding domain protein |
Protein accession | YP_003102592 |
Protein GI | 256378932 |
COG category | [R] General function prediction only |
COG ID | [COG5012] Predicted cobalamin binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.230842 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGCGG CCGAGACGAC GGCGGTGGCC GAGCGCTCCG AGCTGCTGTG GCAGGCGGTC GTGGCCGGTG ACGAGCACAC CGCCACCGAC GTCGTGCTGG CCGCGCTCGA CTCCGGGCTC GACCCCGAGA CGGTGCTGCT GGACGTGATC GCGGGCGTGC AGCGGCGGGT CGGCGAGGAG TGGGTGGCGA ACCGGCTCAC CGTCGTCCAG GAGCACGCGG CCACCGCCAT CAACGACCGG GTCATCACCG TGCTCGGCGT GCGCGCGCGC ACCAGGCCCA CGCTCGGCCG GATCACCGTG GCCTGCGTGG ACGGCGAGTG GCACGCGCTG CCCGCCCGGC TGCTGTCGGA GGTGCTGAAG CTGCGCGGCT TCCAGGTCGA CTACCTGGGC GCGCAGGTGC CCGCGCCGCA CCTGGTCACG CACCTGCACC GCACCGACCC GGACGCCGTC GCGCTGTCCG GCTCGCTGGC CACCAGGCTG CCGACCGCGC ACGCCACGAT CACCGCCTGC CAGGCCGCGG GCGTGCCCGT GCTCGCGGGC GGCCGGGCGT TCGGCGTGGA CGGGCGGTAC GCGCGGCTGC TCGGCGCGGA CGGCTGGGCG CCCGACGCGC GCGCCGCCGC CGACCACCTC GCGGCCGGTC CGCCGCCGAG GCCGAGGTCC GGCCACCAGC CGATCGACGA CCTGCCGCAC CTGGGCGACC AGGAGTACAC CATGATCTCC AGGACGGCCC AGCAGTTGGT GAAGGCCGTC TACACGGGAC TGGAGGAGCG GCTGCCGGTG ATGCGGACCT ACACCGAGCA GCAGCAGGAG CGCACCGCCG AGGACCTCCT GCACATCGTC GAGCACCTCG CGGTGGCGCT GTACACCGAC GATCCGGAGC TGTTCACCGA CTTCCTCGGC TGGACCGGGG ACGTGCTGTC CTCGCGCGGC GTCCCCCCGG CCTTCCTGCG CCCCGCCGTG GCCCTGCTGT CGGCCGAGCT GCGCGACTTC CCGAGGGCGA CGGCGTTCCT GGCCGCCCAC GGCGCCACCG CGTCCGACCC GCCGAGGTCC CACGACCACG CGCTCGCCCA CCACCCCTCC GACCCCGGAC CCGCCGCATG A
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Protein sequence | MTAAETTAVA ERSELLWQAV VAGDEHTATD VVLAALDSGL DPETVLLDVI AGVQRRVGEE WVANRLTVVQ EHAATAINDR VITVLGVRAR TRPTLGRITV ACVDGEWHAL PARLLSEVLK LRGFQVDYLG AQVPAPHLVT HLHRTDPDAV ALSGSLATRL PTAHATITAC QAAGVPVLAG GRAFGVDGRY ARLLGADGWA PDARAAADHL AAGPPPRPRS GHQPIDDLPH LGDQEYTMIS RTAQQLVKAV YTGLEERLPV MRTYTEQQQE RTAEDLLHIV EHLAVALYTD DPELFTDFLG WTGDVLSSRG VPPAFLRPAV ALLSAELRDF PRATAFLAAH GATASDPPRS HDHALAHHPS DPGPAA
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