| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4913 |
|---|
| Symbol | |
|---|
| ID | 8329111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 5859252 |
|---|
| End bp | 5861474 |
|---|
| Gene Length | 2223 bp |
|---|
| Protein Length | 740 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | 644945353 |
|---|
| Product | peptidase S45 penicillin amidase |
|---|
| Protein accession | YP_003102585 |
|---|
| Protein GI | 256378925 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2366] Protein related to penicillin acylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0991334 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGACC GGGCAGCACG CCGCCACCGG GAGCCCTCGC GCCTGGCCGT CCGCGCGGGC
CTGGCCGCCC GCGCCGCCGC GCTGCGCCTG GCCTCCGGGC TCGCCTCGGC CGTCACCGCC
GTCTCCACCC CGAGCGGCCC GCTGGCCGAC GAGGTGCGGG CGCTCGCCGC CATGCGCCGC
GCCCACCGCG CCGCCGCCCG AGCCCAGGCC GCGCTGTTCC CCGGAACCCG GATCGACCGG
CTCGGCGTCC CGCTGGTCTC GGGCGGCGAA CCGCGGGTGT GGCGCGCGCT CGGGTTCGCC
TCCGCCCGCT CGCACGGGTT CAGCATGGAC CTCACCCGCC GCCGCGCCGA GGGCTCGCTC
GCCGACCTGC TCGGCGACGG GTCCGCCGAG GCCGACGCCC GGCAGCGCGC GCTCGGGTTC
GCCTTCTACG CCGAGCGCGT CGTCGCCGCC CTCCCACCCG ACCAGCGGGC CCTGCTCGAC
GCCTACGCGG AGGGCGTCAA CGCCCTGCTG GAGCACGCGC CCCCGTGGGA GCACGCCGTG
CTGGGCACCA CCCCGCGCCC GTGGGCGCCC GAGGACAGCG TCCTCGTCGT CCAGGACCTG
TTCCAGCAGC TCACCGACCC CGGCGAGCAC GAGCTGGCCG CCCGCCTCGA CGACCTGCTC
GGCCCCGGCG GGGGAGCGGC GCTGCTCGCC GGTTCGGTCG GGACCACCAC CGCGCTCGAC
GGCACGCCCG CGGGCCGCCC CGAGGGCCGC GACCTGCTGC GCGCCGCGAT CGCGACCGCG
CGGTCGCGGG ACGGCGCGGC GGAGCGGCGC CCCGGCGGCG GCCCGGCCCC GGTGCTGGGC
TCCAACAGCT GGTCCACCGG CACCCTGCTG GCCAACGACG TGCACCTGCC CCTCGGCGTG
CCCAACACCG TCCTGTTCGC CAGGGCCGTC CTCGACGGCG TCCCCGTGCA GGGCTTCCTG
CGACCCGGCG TCCCGGTGTT CCTCGCGGGC GCGACCCCCC GGATCGCCTG GGGCCCCACC
CGGCTGTGCG GGCGCACCAG CGCCCGGCTG CCGAAGGGCG CGCCCGGCAC CGAGGTCGTC
GTCGACCGGG TCGACGGGGC CACCGGCGCG CGGATCCGCC TCGCCGAGGC CGGACCGGTG
CTCTCCGACG GGGACGTGCT GCGCTGGCTC GCGCTCGAAC CCGGCGCCGT CGAGTTCGGG
CTGTCCGCCC TGCCGCGCTG CCGCACCGCA GAGCAGGCGT GCCGGGTCGC CACCGCCGCC
GGGTCCCCGC CGATCAGCCT GCTGATCACC GACCGGGACG GCGGCCAGGC CTGGACCGTG
GCGGGCCGCG TCCTCGCGCG GGGCGGGCTC GTGCCCCCGG ACGACGTGCC CCGCCGCACC
GCCCCCGCCT CCGGCGTGCT GGTCACCGCG AACTGCGACC TGGCCGTGCC CGGCCCGGAC
GGCTCGGTCT CCAGCAACGC CTACCCGCAC GACCGGGCCC GCCGCATCAC CGCGCTGCTG
CGCGAGGGCC GGACCACCGA GCAGGTCCAG TCCGACGTGG ACGCCTCGTT CTACGCGCCG
TGGCGCGAGA TCTTCCGCCC GCACCTCGAC CGCTTCCCGG AGGCCGCCGC CGCCGTGGAC
GGCTGGGACG GCACGGCGGG CGTGGGAGCC ACCGGCCTGC AGCACCTGGT CCTGCTGCAC
GGCCTGGTGC GCGGCAAGGT CCTCGCCCCG CTGCGCCCGC GCGTGCCCGC CGGGGACCTG
GTCGGCCCCG GCGAGCTGGG CGCGTTCGAC TCGGAGCTGG CCGACCTGGT CCGCGCGCGG
GACCCCGACC TGCTGCCCGC CGGTCACCGC GACTGGCCGC ACCTGCTGCG CTGGTGCGCG
GAGGCGGCCG TGCGGCACCT GGAGCGCAGG CTCGGGCCGG GCGCGCACGC CCTGCCGTGG
GGCGCGGTCA ACCGGGTGGG GCTGCGGCAC CCGATGTCGG CCAGGCTGCC GCGCCTGGCC
TGGGCGCTCG ACCAGCCCGA CCTGCCGCGC CGGGGGTGCC TGCAGAGCGT GGACGCCTCG
GCCGCCGGGT TCGGCGCCGC GCTGCGCCTG GAGTGCGACC CCGTCGAGGG CCGGTTCCGG
GTCTCCTGGC CGGGCGGCCA GTCCGGCGAC CCGCTGTCCC CCGGCTACCG CTCGTTGTTC
GCCGACTGGT ACGCGGGCCG CCTGGTCTCG CTGCCGGTCC CCACGGGAGA GGAACGGCCG
TGA
|
|---|
| Protein sequence | MADRAARRHR EPSRLAVRAG LAARAAALRL ASGLASAVTA VSTPSGPLAD EVRALAAMRR
AHRAAARAQA ALFPGTRIDR LGVPLVSGGE PRVWRALGFA SARSHGFSMD LTRRRAEGSL
ADLLGDGSAE ADARQRALGF AFYAERVVAA LPPDQRALLD AYAEGVNALL EHAPPWEHAV
LGTTPRPWAP EDSVLVVQDL FQQLTDPGEH ELAARLDDLL GPGGGAALLA GSVGTTTALD
GTPAGRPEGR DLLRAAIATA RSRDGAAERR PGGGPAPVLG SNSWSTGTLL ANDVHLPLGV
PNTVLFARAV LDGVPVQGFL RPGVPVFLAG ATPRIAWGPT RLCGRTSARL PKGAPGTEVV
VDRVDGATGA RIRLAEAGPV LSDGDVLRWL ALEPGAVEFG LSALPRCRTA EQACRVATAA
GSPPISLLIT DRDGGQAWTV AGRVLARGGL VPPDDVPRRT APASGVLVTA NCDLAVPGPD
GSVSSNAYPH DRARRITALL REGRTTEQVQ SDVDASFYAP WREIFRPHLD RFPEAAAAVD
GWDGTAGVGA TGLQHLVLLH GLVRGKVLAP LRPRVPAGDL VGPGELGAFD SELADLVRAR
DPDLLPAGHR DWPHLLRWCA EAAVRHLERR LGPGAHALPW GAVNRVGLRH PMSARLPRLA
WALDQPDLPR RGCLQSVDAS AAGFGAALRL ECDPVEGRFR VSWPGGQSGD PLSPGYRSLF
ADWYAGRLVS LPVPTGEERP
|
|---|
| |