| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4903 |
|---|
| Symbol | |
|---|
| ID | 8329101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 5841304 |
|---|
| End bp | 5842035 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 644945343 |
|---|
| Product | transcriptional regulator, GntR family |
|---|
| Protein accession | YP_003102575 |
|---|
| Protein GI | 256378915 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1802] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGGGC GTGGCAGGCG CGAGGGCGGC CGGATCGGCG GTCCGACCAG CGTCACGGAC
CTGGCGGCGA CGGAGCTGAG GGCGCGCGTC CTCACCGGGC GGCTGGCGCT GGGGCAGCAC
CTGGTGGAGC AGGCGGTGGC CGACGACGTC GGGGTGAGCC GGGCCGCGCT GCGCGAGGCG
CTGCGCGTGC TGGAGCGCGA CGGCCTGGTC GAGCACGTGC CGCGCGCGGG GTGGCGGGTG
GTGACGCTGA CGCTGCGGGA CGCGCACGAG ATCGTGGTGC TGCGCGAGCA CCTGGAGGAG
CTGGCGGTGG AGGCGGGCGT CCCGGCCCGC CCGGCGCCGC TGGCGCGCCT GGACGCGGCG
GTGCGCCGCA TGGAGGCGGC GGCCGACGCG GCCGACGGCG CCCCGGCGGC CCTGGACGGC
CTGGCTTTCC ACCGGGCGTT CATCGGCCTG CCGGACAACC GGAGGCTGAC CGCCGCGTTC
GAGACGATCG CGCATCCGCT GGGCGTGCTG ATGAACCTGA ACCGGGGCGC GCACGAGGAG
ACGGAGACGC TGCACGAACT GGCGGCGCGA CACCGGCGGT TGTGCGACCT GGTCGCGGCG
GGGGAGCCGG GGGAGGTGCG ACGGGAGCTG CGCGCGCACC CGACGACGGC GTTCCTGGGC
CGGGCCGAGC TGTCGGCGGA CGGGGCGGGC CCGGAGGCGC TGGCCTGGGC GGCGGAGCGG
ATGGGACGCT GA
|
|---|
| Protein sequence | MAGRGRREGG RIGGPTSVTD LAATELRARV LTGRLALGQH LVEQAVADDV GVSRAALREA
LRVLERDGLV EHVPRAGWRV VTLTLRDAHE IVVLREHLEE LAVEAGVPAR PAPLARLDAA
VRRMEAAADA ADGAPAALDG LAFHRAFIGL PDNRRLTAAF ETIAHPLGVL MNLNRGAHEE
TETLHELAAR HRRLCDLVAA GEPGEVRREL RAHPTTAFLG RAELSADGAG PEALAWAAER
MGR
|
|---|
| |