| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4886 |
|---|
| Symbol | |
|---|
| ID | 8329084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 5825271 |
|---|
| End bp | 5826164 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644945326 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003102558 |
|---|
| Protein GI | 256378898 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACCG ACCCCGAGGT GGAAAGGCAC TTCCACCGCA TGGAACACTC CGGGCCGCAC
CCCGGAAACC GACCACGATT GCGGAGCCAC GACGTGACCC CTCCCGCCCC GAGCGGCGCC
CAGCCCGGCG TCCCGGCACC CGCCCCTCCC CGGCCGCTGC TGAGCATCCG AGGCGTCGAC
AAGCGCTACC GCACGGCCAA GGGCGCGACG GTGCAGGCGC TGGAGGGCAT CGACCTGGAC
ATCGCCGAGG GCGAGATCGT CGCGGTCATC GGGCCCTCGG GCTGCGGCAA GTCGACGCTG
CTGCGCATGG TCGCCGGCCT GGACGACGAC TACACCGGCG CCGTCGAGTG GCGGCGCCCG
CCGCGCCCCG GCAAGGACAT CGGCTTCGTG TTCCAGGAGC CCGCGCTGCT GCCGTGGCGC
AGCGTGGCGG GCAACGTGGG CCTGGGCCTC GAGGGCCGCA AGGACCTGGA GGGCGCCGAG
CAGCGGGTGG CCGAGCTGCT GGACCTGGTG GGGCTGGGCG ACTTCGCCAA GTCCTACCCG
AAGGAGCTGT CCGGCGGGAT GCGCCAGCGC ACCGCGATCG TGCGCGCGCT CGCCTACGAC
CCGCAGATCC TGCTGATGGA CGAGCCGTTC GGCGCGCTGG ACGCGATCAC CCGCGACCGC
CTGCACGACG ACATCCTGCG GATCTGGGAG CGCACCAGGA AGACCATCGT CTTCGTCACG
CACAGCGTGG AGGAGGCCGC CTACCTGGCC GACCGCGTCG TGGTGATGTC CGCGCGCCCC
GGCCGCATCC GCGCGGTGCA CCGGGTTCCG CTGCACCGCG ACCGCACCCC CGCGACGCGC
GAGCTGCCCG AGTTCGGCCG CTTCGCCGGG ATGCTGCGCG GGGAGCTGGC ATGA
|
|---|
| Protein sequence | MSTDPEVERH FHRMEHSGPH PGNRPRLRSH DVTPPAPSGA QPGVPAPAPP RPLLSIRGVD
KRYRTAKGAT VQALEGIDLD IAEGEIVAVI GPSGCGKSTL LRMVAGLDDD YTGAVEWRRP
PRPGKDIGFV FQEPALLPWR SVAGNVGLGL EGRKDLEGAE QRVAELLDLV GLGDFAKSYP
KELSGGMRQR TAIVRALAYD PQILLMDEPF GALDAITRDR LHDDILRIWE RTRKTIVFVT
HSVEEAAYLA DRVVVMSARP GRIRAVHRVP LHRDRTPATR ELPEFGRFAG MLRGELA
|
|---|
| |