| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4880 |
|---|
| Symbol | |
|---|
| ID | 8329078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 5819649 |
|---|
| End bp | 5820002 |
|---|
| Gene Length | 354 bp |
|---|
| Protein Length | 117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644945320 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_003102552 |
|---|
| Protein GI | 256378892 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCTGC ACCGGAAAAC CGACGAGCTG ACCCAGTGGG AGATTCCGGG GGGAAAGCTC
GAACCTGGCG AGGAGCCCGA GCAGACCGCC GTCCGGGAAC TGCGCGAGGA GGTCGGCGTG
GAGGTCGACA TCGAGCGCAG GCTCGGCGAG CGCGAGTTCT TCCAGGGCGA CTGCCGGATG
GTCTACACGT GGTTCCTGGC GGCCATCACC AGCGGTCGCC CCGAGCCGCT GGAGCCGATC
CACGACCGGC TGTCCTACCA CCACGTCGCC GAGTGGGCGG ACATGGTCGA CCAGCTCTCC
CCGAACAGCA GGAACTTCAT CAGCGAGGTC TCCCGAGGGG GCATCTCGCT CTAG
|
|---|
| Protein sequence | MMLHRKTDEL TQWEIPGGKL EPGEEPEQTA VRELREEVGV EVDIERRLGE REFFQGDCRM
VYTWFLAAIT SGRPEPLEPI HDRLSYHHVA EWADMVDQLS PNSRNFISEV SRGGISL
|
|---|
| |