Gene Amir_4803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4803 
Symbol 
ID8329001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp5719816 
End bp5720397 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content76% 
IMG OID644945244 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003102476 
Protein GI256378816 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.539659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTCGCA CGACCGGACG GTCCCCTGAG GACACCCGTC GCCTGGTGCT GGACGCGGCG 
GCGCGGGAGA TCTGCCGCGA GGGCATCAGG ACCAGCCTGG ACACGATCGC CCAGCGCGCG 
GGGGTGTCCA AGGGCGGCCT GATCTACCAC TTCCCCAGCA AGGAGGCGCT GCACGTGGCC 
CTGGTCGCGG AGGAGGTGGA CGGCTGGCGG GAGCTGGTCG AGCACGAGGT CGACCCGGAC 
GACCACGGGC CGGGCAGGCT GACCCGCGCC TACGTGCGGG CGAGCCTGGC GCCGTTCGAC 
GGCGAGGACG CGCGCGAGCG GTTCCGGCTG TTCGCGCAGC TCAGCACGGT CCCGGCGGCG 
GTGCGGATGG CGGAGGAGGA CGACCGGCGC TGGCAGCGCG AGCTGGAGGC GGACGGCGTG 
CCGCAGGCGA CCAGGGTGCT GGTGGTCGCG GCGGCCGACG GCGTCGGCGG GCCGCCGCTG 
TGGGTGGCCC CGCCGTCGGA CGAGGTGCGC GCCCGACTGC TGGCGGACCT GCTGGCGATG 
ATCGACGCGG CGGTCGCGGA AGCCCCGGTC AGCGACGGGT GA
 
Protein sequence
MGRTTGRSPE DTRRLVLDAA AREICREGIR TSLDTIAQRA GVSKGGLIYH FPSKEALHVA 
LVAEEVDGWR ELVEHEVDPD DHGPGRLTRA YVRASLAPFD GEDARERFRL FAQLSTVPAA 
VRMAEEDDRR WQRELEADGV PQATRVLVVA AADGVGGPPL WVAPPSDEVR ARLLADLLAM 
IDAAVAEAPV SDG