Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4649 |
Symbol | |
ID | 8328847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 5535531 |
End bp | 5536811 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644945095 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003102327 |
Protein GI | 256378667 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.788298 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGCGG GGGCCGGTGG CGCCGGGGAC GGTGGGGGCG GTGGGGGCGG TGACGAGCAG CGGTCGGTGC TCAAGGTCAT CCTCGGTTCG CCGCGCCCGG TCTGGATCCT CGTCGCGGGC GTGTTCGTCA ACCGGTCCGG CTCGTACTTC GCCACGTTCC TGACGCTGTT CCTGGAGCAG CTCGGGTTCA CCCTGGCCCA GATGCCGCTG ATCCTGCTGG CCGTCGGCGT CGCGATCCCG TGCGGGTCGA TGCTGGGCGG CTGGGTGTCG GACCGCTTCT CCCGCAAGGC GTCCCTGGTC GGGTCGACGC TGCTGGCGGC GGTCGGGCTG GCCGTGATCG GCTTCGCGCC GACGAAGGCG GTCGCGCTGG TGGGCGTGTT CGCGGCGGCG CTGTTCGCGC AGTCGTACCT GCCCGCGGCC TCGGCGCTGC TGGTGGACCA CACCCGCGAG CAGGACCGGG TGCCGGTGTT CGCGTTCTTC CGGCTGGCGC TGAACGTGGG CGCGGCGGTG GGGCCGGTGC TGGCGATCGC GATCACCCCG TACGGGCTGG AGTCGCTGTT CCTGGTGAGC AGCGGCGCGT ACCTGCTGTT CTCGCTGGTG CTGTGGCTCG GGCTGCCGAA GCCCGCGGCG CGGGTGGCCG AGGAGGCGTC GGCGGACGAG GTGGCGGCGG GCGGCAAGCG CTTCCCGGCG CAGCTCGTGC TGTTCTTCAC CGGCGTGCTG CTGATCACCG CCGTGTACGT GCAGTACTCG TCGACGGTCC CGCTGGCGGT GGCGGACTTC CACGACGCCA AGGTGTACGC CGGGCTGCTG ACGCTGAACG CGGTGCTGGT GATCGTGTTC GAGGTGCCGC TGAGCGCGTG GACGCGGAAG CTGCCGTGGC GGTTGCCGCT GGTGCTGGGC ACGGCGCTGA TGGCGGTGGG CATCGCGGCC TCCGGGTCGT TCCCGTCGTT CGCGCTGCTG ATCGCGAGCG TGGTGACCTG GACGATCGGC GAGATCCTGT TCTCCCCGGT GGTGGCGAGC GCCGCGGCGT CGCTGTCGCC GAGCGGGCGG GTCGGGCGGT ACCAGGGGTA CCTGGCGGCG GTGCAGTCGA CGGCGTTCGC GCTGGGACCG GCGGTGGGCA CGTACGTGTA CGGGCGCGGC GCGCCGCTGC TGTGGGTCTC CTGCCTGGTG GCGGGACTGC TGGCGGCGGT GGCGTTCACG GCCGCGCACA AGCCGCGCGG CGAGCGGGGC GAGGGCGGCG TGGGCGAGGG CTCGGAGCGG AGCAGCGGCG CGGCGGTCTG A
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Protein sequence | MSAGAGGAGD GGGGGGGDEQ RSVLKVILGS PRPVWILVAG VFVNRSGSYF ATFLTLFLEQ LGFTLAQMPL ILLAVGVAIP CGSMLGGWVS DRFSRKASLV GSTLLAAVGL AVIGFAPTKA VALVGVFAAA LFAQSYLPAA SALLVDHTRE QDRVPVFAFF RLALNVGAAV GPVLAIAITP YGLESLFLVS SGAYLLFSLV LWLGLPKPAA RVAEEASADE VAAGGKRFPA QLVLFFTGVL LITAVYVQYS STVPLAVADF HDAKVYAGLL TLNAVLVIVF EVPLSAWTRK LPWRLPLVLG TALMAVGIAA SGSFPSFALL IASVVTWTIG EILFSPVVAS AAASLSPSGR VGRYQGYLAA VQSTAFALGP AVGTYVYGRG APLLWVSCLV AGLLAAVAFT AAHKPRGERG EGGVGEGSER SSGAAV
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