Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4386 |
Symbol | |
ID | 8328583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 5184380 |
End bp | 5185381 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644944848 |
Product | aminotransferase class I and II |
Protein accession | YP_003102081 |
Protein GI | 256378421 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.933282 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCCCGGA TCGTCCATCA GCTCTCCCTG AACGAGAACC ACTCGCCGCC GCTGCCGGGG GTGCCCGAGG CGGTGGCCGG GTTGGTGGAC CGGGTCAACC TCACCCTGGA CCCGCTGTCG GCGGGCCTGG AGGCGAAGAT CGCCGGGCGC CTGGGCGTCG GCGCGGAGCG CGTGGTGGCC GGGGTGGGCT CGGCGGCGCT GCTCCAGCAG TTCCTGATGA CCCACGCGGG CGCGGGCTCC GAGGTCGTGC ACACCTGGCC CTCGTTCGAG ATGTACCCGC TGCTGATCGG CAACTCGCGG GCCACCGCCG TCGCCGTGCC CGGCCCGGAC GACCGGATGG ACCTCGCCGC CGTGGCCGCC GCCGTCACCG ACGACACCAA GGTCGTCCTG CTGTGCAACC CGAACAACCC CACCGGCGAG GTGCTGGACG CCGCCCAGTT GCGTGGCCTG CTCGACGCCC TGCCGCCGCA CGTGCTGCTG CTGGTGGACG AGGCCTACCG CGAGTTCGCC GACCCCGACG TGGTCGCCGA CGCGCTCGAC CTGGCGCGGA TCGACGACCG GGTCGCGGTG GTGCGCACCT TCTCCAAGGC GCACGGCCTG CTCGGCCTGC GCGTGGGCTA CCTGGTCGGC GCGGAGAAGA TCGTCGCGCC GCTGCGCATG ACCACCCTGT TCTTCCGCGT GCCCACCGTC GCCCAGGCCG CCGCGTCGGC CGCGCTCGAC GTCGAGGAGC AGGCGCGCCG CAACTGCGCC GCCGTCGCCG TCGAGCGGGA CCGGGTCCGC GACGGCCTGG TCGAGCTGGG CCTGGACGTG CCGCCCAGCG GCGGGAACTT CGTGTGGGTG CGGCTCGGCG AGCGCAACGA GGCGTTCCGC GACCACCTGG CCGAGCACGG GATCGCCGTG CGGGTGCTGG CGGGCGGCAG CGGCGTGCGG GTGAGCACCG GGCTGCGCGA GGCCAACGAC GCGGTGCTGG CCGCGGCGAA GTCCTTCACC GCCAACGGGT AG
|
Protein sequence | MARIVHQLSL NENHSPPLPG VPEAVAGLVD RVNLTLDPLS AGLEAKIAGR LGVGAERVVA GVGSAALLQQ FLMTHAGAGS EVVHTWPSFE MYPLLIGNSR ATAVAVPGPD DRMDLAAVAA AVTDDTKVVL LCNPNNPTGE VLDAAQLRGL LDALPPHVLL LVDEAYREFA DPDVVADALD LARIDDRVAV VRTFSKAHGL LGLRVGYLVG AEKIVAPLRM TTLFFRVPTV AQAAASAALD VEEQARRNCA AVAVERDRVR DGLVELGLDV PPSGGNFVWV RLGERNEAFR DHLAEHGIAV RVLAGGSGVR VSTGLREAND AVLAAAKSFT ANG
|
| |