| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4275 |
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| Symbol | |
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| ID | 8328472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 5035654 |
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| End bp | 5038338 |
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| Gene Length | 2685 bp |
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| Protein Length | 894 aa |
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| Translation table | 11 |
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| GC content | 79% |
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| IMG OID | 644944742 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003101975 |
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| Protein GI | 256378315 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCCA CCCCCGCGCC CGCGTCCACC CCGCTCGTCG GCAGGACCCG CGAGCTGGCC
GCCATCTCGG CGGTGCTCGG CGCGGCGCGC GAGGGGCGGG GTGGGGCGCT GGTGCTGACC
GGCGAGCCCG GCGCGGGCAA GTCCGCCCTG CTCGACCGGG CGCTCGCCGA CGCGACCGGC
TTCGCGGTGG CGCGGGCCAC CGGGGCCGAG TTCGAGCGCG ACTTCCCCTA CGCCGGGCTC
GCCCAGCTGT GCGTGCCGCT CCTGCCGCAC CTCGACCGGG TCTCCCCGCA CCACCGCGAG
GCGCTCGGCG TCGCGTTCGG GCTCGCCGAG GGCGCGCCCG ACCCGTTCCG CGTCGGCCTG
GCCACCCTGG AGCTGCTCAC CTCCACCGCC CGCGCCCGCC CGCTGCTGTG CCTGGTCGAC
GACGCCCACT GGCTCGACCC GGACTCCACC ACGGTCCTGA CCTTCCTCGC CCGCCGCATC
GCCGCCGACC CCGTCGCGGT CCTGTTCGCC ACCCGCCCGC CCGCCACCGA CCTGGACCGC
CTGCCCGGCC TCCCCGTGGC GGGCCTGGGC GACGACGCCG CCCGCGCCCT CCTCGGCGCG
TTCCCGCTGG ACGAGCGGGT CCGCGAGCGC CTGGTCGCCG AGGCGCGCGG CAACCCGCTG
GCCCTGCTCG AACTGCCCCG CGCGGGCGGG TTCGCGCCGC CCGGACCTGC GTCCGCGTCC
ACCCGCGTCG AACTCGGCTT CCGGCGCAGG CTCGACGCCC TGCCCGCCCC CGCCCGGCTG
CTGCTCACCA CCGCGAGCGC CGACCCCACC GGCGACCCCG ACCTGCTGTG GCCCGCCGCG
CGCCTGCTCG GCGTTGACGT CCGGCAGGCG GGCGCGGACG CCGCCGCGAC CGAACTGGCC
GAGTTCGGCG CGCGCATCCG CTTCTGCCAC CCGCTCGCCC GCTCGGCCGC CTACCGCGCC
GCGTCCCCGG ACGAGCGCCG ACGGGCGCAC GGCGCGCTCG CCGAGGTCAC CGACCCGCTC
CTCGCGCCCG ACCGCCGCGC CTGGCACCGC GCCCAGGCCA CCACCAGCCC GGACGCCGAG
GTCGCCACCG ACCTGGAGCG CTGCGCCTCC CGCGCCCAGG CGCGCGGCGG CGTCGCGGCG
GCTGCGGCGT TCCTGGAGCG CTCCGCCGCG CTGTCCCCGG ACGCCGGACC GCGCCTGGCG
CGCACCCTGG CCGCCGTGCG CGCCCACCTC GACGCGGGCG ACGGCGACGC CGCCTCCACC
CTCCTCGGCA CCGTCGACCC CGCCCCGCTG GACGAATCCC GCCGCGCCTC GGTCGAACTG
CTCAGGGGGC GCGTCGCCTT CACCCGCCCC GACGACGGCA GCGGACCGGC CCTGATGGTC
GGCGCCGCCG AACGGCTGTC CTCAGTGGAC GCCGAGCGGG CCCGCGACTG CCTGGTCGAG
GCCATCGAGA CCAGCCTGCT CGTCGGACGC GGCGGGGGAG TCGTCGACGA GGTGGTGAAC
CGGGCCGCCC GCACCGCGCC GCCGTCCGCG CGACCCGACG TCCTGGACGC GCTGATCACC
CTGTCCCGCG GCGGTTACCG CGTCGCCGCA CCCGCGCTCG AAGCCGCGCT GCACGGCAAC
GGAAGTCCAC TGTGGACGAG ATGGCCCGCG ATCTCCGTCA TGGTCGCCGC CGAGCTGTGG
GACCTGGACG CGCTCGCCGC CATCGCCGAG CACCTGGTGA CCACCGGCCG CGACCTCGGC
TCCCCGGTCG CCCTCCGCCT GGGCCTCGCC CAGCGCGCCA CCTGCGCCAC CCTCGTGGGC
GACGTCGCGG TCGCGTTCGC CGCCACCGCC GAGGAGGAGG CCGTCGCCGA CGCGCTGGGC
GAACCCCCGC TGGCCCACCC CCGCCTGCAC CTGGCCGCCC TGCGCGGCAG GCGCGCCGAC
GCCCTCGAAC TCGCCGAGTC CGCGAACCGG GGCCCCGGCG GTGGGCGCGT CACCAACCTG
CACTGGACCA CCGCCCTGCT GGCCAACGGC CTCGGCGACC ACCCGGCCGC GCTCGCCGCC
GCGCGCGAGG CCACCGCGCC CAGCAGGCTG TTCCTGGTCG GCGCGGTCCT GCCGGAGCTG
GTGGAGGCCG CCGTCCGCTG CGGCGAGGAC GCGGTCGCCG CCGAGGCCCT CGAAGCGCTC
ACCGAGCGCG CCGAGGCCAG CCCCACCCCG TCCGGCCTCG GCGTCGCCGC CTGCGCGCGC
GGGCTCGTCA CCGGCGAGGA GGAGCACTAC CGGGACGCCG TCGACCTCCT CGCGCGCAGC
CCCCTCGTGC CGTACCGGGC CCGCGCCCAC CTGCTGTACG GGGAGTGGTT GCGCCGCAAG
GGACGCCGCC GGGACGCGGT GGCGCACCTG GGCTCCGCGC ACGAGCTGCT GTCCGCCTCC
GGGGCCGAGG GCTTCGCGCG CCGGGCCGAG AACGAGCTGC GCGCGGCGGG GGAGCGGGTC
GACCGGCGGG CGGGCGCGGA CCGCGAGAAG CTCACCGCGC AGGAGGTCGC CGTGGCCGGG
CTCGTGGTCG GCGGGGCCAC CTCGCAGGAG GTCGCGGTGC AGCTGTTCGT CAGCAAGCGC
ACCGTGGACG CCCACCTGCG CAACATCTTC CGCAAGCTCG GCATCACCTC GCGCAGGCAG
CTCAAGGACC ACCCGGACCT GGTCGCGCTG GACCGGCTGC CGTGA
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| Protein sequence | MSATPAPAST PLVGRTRELA AISAVLGAAR EGRGGALVLT GEPGAGKSAL LDRALADATG
FAVARATGAE FERDFPYAGL AQLCVPLLPH LDRVSPHHRE ALGVAFGLAE GAPDPFRVGL
ATLELLTSTA RARPLLCLVD DAHWLDPDST TVLTFLARRI AADPVAVLFA TRPPATDLDR
LPGLPVAGLG DDAARALLGA FPLDERVRER LVAEARGNPL ALLELPRAGG FAPPGPASAS
TRVELGFRRR LDALPAPARL LLTTASADPT GDPDLLWPAA RLLGVDVRQA GADAAATELA
EFGARIRFCH PLARSAAYRA ASPDERRRAH GALAEVTDPL LAPDRRAWHR AQATTSPDAE
VATDLERCAS RAQARGGVAA AAAFLERSAA LSPDAGPRLA RTLAAVRAHL DAGDGDAAST
LLGTVDPAPL DESRRASVEL LRGRVAFTRP DDGSGPALMV GAAERLSSVD AERARDCLVE
AIETSLLVGR GGGVVDEVVN RAARTAPPSA RPDVLDALIT LSRGGYRVAA PALEAALHGN
GSPLWTRWPA ISVMVAAELW DLDALAAIAE HLVTTGRDLG SPVALRLGLA QRATCATLVG
DVAVAFAATA EEEAVADALG EPPLAHPRLH LAALRGRRAD ALELAESANR GPGGGRVTNL
HWTTALLANG LGDHPAALAA AREATAPSRL FLVGAVLPEL VEAAVRCGED AVAAEALEAL
TERAEASPTP SGLGVAACAR GLVTGEEEHY RDAVDLLARS PLVPYRARAH LLYGEWLRRK
GRRRDAVAHL GSAHELLSAS GAEGFARRAE NELRAAGERV DRRAGADREK LTAQEVAVAG
LVVGGATSQE VAVQLFVSKR TVDAHLRNIF RKLGITSRRQ LKDHPDLVAL DRLP
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