Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4244 |
Symbol | |
ID | 8328437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 5001773 |
End bp | 5002636 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644944708 |
Product | helix-turn-helix domain protein |
Protein accession | YP_003101945 |
Protein GI | 256378285 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.649143 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCACCGGG ACCAGCTCGC CGACTTCCTC CGCCGCCGCC GCGAGGCGAT CCGACCCGCC GAGGTCGGCC TCGCCGAGGG GCCGCGCCGC CGCACCTCCG GCCTGCGCCG CGAGGAGGTG GCGGCGCTCG CGGGCATGTC CACCGACTAC GTCGTGCGCC TGGAGCAGGG CCGCAGCAGC CAGCCGTCGA CCCAGCTGCT CGGCGCGCTG GCGCGGGCGC TGCGGCTGTC CGGCGACGAG CGCGACCACC TGTTCCGCCT GGCCGGTCAC CAGCCGCCGC CCGCCTCGGG GTCGGCGCGG CAGGCGCGGG CCGGGCTGGC GCGGCTGCTC GACCTGATCG ACGGCACCCC CGCGCTGGTG ATGTCGGACC TGGGCGAGAC GCTGGCGCAG AACCGGGCGG CGGTGCTGCT CATGGGCGAC CACAGCGGGT TCACCGGCGA CGAGCGCTAC CTGCTGCACC GCTGGTTCAC CGCACCGGAC GCGCTCGCCG CGCACGGCCC CGAGGAGCGC GAGCGGCACT CGCGGAGCCT GGTCGCGGAC CTGCGGGCGG CGGTGGGGCG GCGGGTCGGG GCGCCGGACG AGGCGGTGGC GAACCGGCTG GTGGCGCGGC TCGCGCGGGT GAGCGGCGAG TTCCGGCGGC TGTGGGCCGG GCACGAGGTG GCGGTGCGCG CCATGGACGA CAAGACGCTC GTGCACCCGG CCGTGGGCAG GCTGGTCATG GACTGCGAGA CGCTCGTGAC GCCGGACCAG CGGCAGCTGC TGCTCGTGCT CACCCCGGCC GACGCGGAGA CCCGCGAGCG GCTGGAGCTG CTGCGCGTGC TGGGCGTGGA GGAGTTCCCC ACCGAGCAGG CGCACCTGGC CTGA
|
Protein sequence | MHRDQLADFL RRRREAIRPA EVGLAEGPRR RTSGLRREEV AALAGMSTDY VVRLEQGRSS QPSTQLLGAL ARALRLSGDE RDHLFRLAGH QPPPASGSAR QARAGLARLL DLIDGTPALV MSDLGETLAQ NRAAVLLMGD HSGFTGDERY LLHRWFTAPD ALAAHGPEER ERHSRSLVAD LRAAVGRRVG APDEAVANRL VARLARVSGE FRRLWAGHEV AVRAMDDKTL VHPAVGRLVM DCETLVTPDQ RQLLLVLTPA DAETRERLEL LRVLGVEEFP TEQAHLA
|
| |