Gene Amir_4154 details

Gene Information

• Locus tag: Amir_4154
• ID: 8328347
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 4888507
• End bp: 4890438
• Gene Length: 1932 bp
• Protein Length: 643 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 644944618
• Product: hypothetical protein
• Protein accession: YP_003101855
• Protein GI: 256378195
• COG category: [S] Function unknown
• COG ID: [COG4103] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGGGCTGT TCGACCGGTT GCTGAAGGTG TTCAACATCG AACCGGCGAG CGCGAGCACA 
CCGGTCCAGG TGCAGCAGGA GCCTCCCGCG TTCGTGCCGT TCCCCGACGC GGGGCCGACC 
GCGACGAAGG TCCTGGCGAT GCCGCTGGCC GAGCAGGAGG GCCCCAACCC GACGCGGGCG 
CTGATGACGT CCTCGCCGAA CGCGATCGCC TGGGTGCCGC CGGGCACCTC GGTGTGGGTG 
CCGGACGCCA CGCTGCCCGG CGGGATGCTC TACTACGGCA GGCTCCCGCA GGGCAGGCCG 
CAGGGGAACC GGGACGGCGA GGTCATCGAC CCGGCGCTGC CGATCGACTG GGACGTGCCC 
GACTACGGCG GCCGGGACGT GCCCGAGCAG CCCGCGTACC ACTCGCTGAC CCCGCAGGCC 
AGGGCCGCGT ACGTGCTGTG GCTGGAGAGC GGGCGGCGGG CGACGACCGC GCACATCGGC 
TACGTCTTCC TGTACTTCTA CGGCCTGGAG CGCCGGGCGC TGGTGGACGC CGCGCGGGAC 
CCGGCGGCGA AGGCCGACCT GCCGCGCGTG CTGGTGGAGG TGACCCGGCT GATCGAGGTG 
TACGGGCACC ACGCCGGGTT CCGCGCGCAG GCCGAGGCGT TCCAGCAGGT GCTGCGGGTG 
CTGGGCGGCG GCGACGTGTT CGCGCCGCCG GACCCGGCGG TGCTGTCGGC CGAGGAGGTC 
GCGCACGACC TGGCCGTGGG GATCGGCGGT TTCGTCGCGG ACGAGCGGCC GGTCCCGGCG 
GAGTGGGCGT GGGCGTGGGC CATGGCGCAC CCGGCGGTGT CGCTGAAGTC GGCGGCCACC 
CGCTACCCGG AGCTGTTCCG CGCCCTGTTC CACGCGCGCT ACCGGGCGCA GCACGGGCCG 
GGCATGGTGG TGCGCCCGCT CAAGCGCAGG GTGAAGCTGT CCTACGTCCC GGCGAACCCG 
GCGATCAAGT CGGCGGCGCT GTCGGCGGAC CTGCCGGACG TGATCAGCGC GGCGGCGCCG 
ACGAAGGTGC TGACGGCGCT GGTCGACTCG TGCACCGAGG ACCTCGGCCC GTACAGCAGG 
CTGCTGGCGC GCAACGCGGA CGCGGCGGGC ACGCTGACCG CGCTGCTCCT GCTGCCCGCC 
GAGCTGTTCG ACCACCCGTC GCCGGTGCTG GCCGACCCGT CGCCGGAGCT GGAGGAGCTG 
CTGGACCTGA TCGACGAGGC GCTGCCCGGC CGGACCTGGC AGTGCGGCGT CGAGGTGTCG 
GACCTGGTGG CGCTGTGGCC CGCGCGCGCG ACGGGCAAGT TCACCAAGGC GGACGCGGTC 
GGCATGGCCG AGCTGCTGGG CAGGCTCGGC GTCGGCATCG AGCCGGACGC GCGGCTGGGC 
GGCCCCGTGC AGTCCGAGGG GCCCGCCGTG CTGTTCCGGG TCACCGCCGA GCAGCCGAGG 
GAGCTGACGC CCGCGTACGC GTCCGCGACG GCGCTGCTGC ACCTGGCGGC GGTGGTGTCG 
ACCGCCGACG ACGAGGTGTC CGACGCCGAG TGGGGGCACC TGGTCGCGTA CCTCCAGTCG 
CGGCTGGACC TGACGCCGGG CGAGCGGATG CGGTTGACCG CGCACCTGGA CTGGCTGCTG 
GTGTCGCCGC TCAAGCTCAC CGGGCTGGCG AAGCGGATCA GCGTGCTCGG CGACGAGCAG 
CGGGCGCAGA TCGCCGAGGT GGCGAGCGCG ATCGCGGCGG CGGACGGGGA GATCTCGGAG 
AGCGAGGTCG CCGTGCTGCG CAAGATCTAC AAGCTGCTGG GGCAGGACCC GGACTCGGTG 
CGCACCGGCA TCGTGGCGTT CCGGGAGGCC GAGACCAAGC CGGTCTCGGT GCTCCAGGGC 
GGGACGGACG GCGGTGGCGG CGGCGAGGTG GCGGCGATGC TGACGTTCGA GGAGGAGCAG 
GACAACGGCT GA 

 

Protein sequence

MGLFDRLLKV FNIEPASAST PVQVQQEPPA FVPFPDAGPT ATKVLAMPLA EQEGPNPTRA 
LMTSSPNAIA WVPPGTSVWV PDATLPGGML YYGRLPQGRP QGNRDGEVID PALPIDWDVP 
DYGGRDVPEQ PAYHSLTPQA RAAYVLWLES GRRATTAHIG YVFLYFYGLE RRALVDAARD 
PAAKADLPRV LVEVTRLIEV YGHHAGFRAQ AEAFQQVLRV LGGGDVFAPP DPAVLSAEEV 
AHDLAVGIGG FVADERPVPA EWAWAWAMAH PAVSLKSAAT RYPELFRALF HARYRAQHGP 
GMVVRPLKRR VKLSYVPANP AIKSAALSAD LPDVISAAAP TKVLTALVDS CTEDLGPYSR 
LLARNADAAG TLTALLLLPA ELFDHPSPVL ADPSPELEEL LDLIDEALPG RTWQCGVEVS 
DLVALWPARA TGKFTKADAV GMAELLGRLG VGIEPDARLG GPVQSEGPAV LFRVTAEQPR 
ELTPAYASAT ALLHLAAVVS TADDEVSDAE WGHLVAYLQS RLDLTPGERM RLTAHLDWLL 
VSPLKLTGLA KRISVLGDEQ RAQIAEVASA IAAADGEISE SEVAVLRKIY KLLGQDPDSV 
RTGIVAFREA ETKPVSVLQG GTDGGGGGEV AAMLTFEEEQ DNG