Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4119 |
Symbol | |
ID | 8328312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 4840147 |
End bp | 4840935 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644944583 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003101820 |
Protein GI | 256378160 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.840918 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAGGAAG TCGTGGAACA GGCAGTCGGT CGCGTCATCG AATTCATGCG CAGCAGCATG GGCGAGCAGT TCACCATCGA CGACATGGCC CGAGCGGCGA TGTACAGCAA GTTCCACTTC TCCAGGGTCT TCCAACGCGT CACCGGCGTC TCGCCGGGGC GGTTCCTGTC CGCGATGCGG CTGCAGGAGG CCAAGCGGCT GCTGGTGTCC ACCACGTTCA CCGTCACCGA CATCAGCCAC CGCGTCGGCT ACACCAGCGT CGGCACGTTC AGCTCCCGCT TCCGCGCCAG CGTCGGCGTC TCGCCCACCA CCTACCGCCA GCTCGGCGGC TTCCCGCCGC AGACCTCCGC GCTCGTCGCC GCCTCCACCC CGGTCGGCCC GCTGGCCGAG GGCGGCGGGC TCGGCGAGGT GCGCGGCCGG GTCGGCACGC CCAGGGGCGA CCTGCCGGGC CCGATCTTCG TGGGCCTGTT CCCCGACCTG ATCCCGCAGG GCACCCCGGC CCGCTGCACG GTGCTCGACC GCACCGGCCC GTACGCGATC ACCGACGTGC CGCCGGGGAC CTGGCACGTG CTGTCCACGA CGGCCTACCC GTCCTTCGCG GGCAAGCCCG TGCGGGCGGT CGCCGAACCC CCGTCGGTCG CCTCCGCCGG GCCCGTGACC GTGCCGCCGG GGGAGCTGGT CGAGCGGATC GACCTGGACC TGCGGCCGAG GGGCGCGCTG GACCCGCCGG TGCTGCTGGC GCTGGTGGAC ATCCGCACCA TCGTGCTCGC CGCGACCGCC GCCAGCTGA
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Protein sequence | MEEVVEQAVG RVIEFMRSSM GEQFTIDDMA RAAMYSKFHF SRVFQRVTGV SPGRFLSAMR LQEAKRLLVS TTFTVTDISH RVGYTSVGTF SSRFRASVGV SPTTYRQLGG FPPQTSALVA ASTPVGPLAE GGGLGEVRGR VGTPRGDLPG PIFVGLFPDL IPQGTPARCT VLDRTGPYAI TDVPPGTWHV LSTTAYPSFA GKPVRAVAEP PSVASAGPVT VPPGELVERI DLDLRPRGAL DPPVLLALVD IRTIVLAATA AS
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