Gene Amir_4008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4008 
Symbol 
ID8328201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp4689453 
End bp4690595 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content76% 
IMG OID644944481 
Producthypothetical protein 
Protein accessionYP_003101718 
Protein GI256378058 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGCGA AGGTCGTCCT GCCCGGCGGG CGGGTCCACG TGCTGCGCGA GCCGGTCGCG 
CGGGTCGTCT CGGCCGAGCC GTTCCTGACC AGGGTGGCGT TCGCCGCCGC GCACGTGGTC
GCGGACCCGT TGGGGGACAA CACCCCCGGC GCGCCCGCCG CGATCGACTG GGACGCCACG
CTCGCGTTCC GCAGGCACCT GTGGGCGCAC GGGCTGGGCG TCGCCGAGGC GATGGACACC
GCGCAGCGGG GCATGGGCCT GGACTGGGCC GCCTGCCGCG AGCTGATCCG GCGCAGCGCC
GCCGAGGCCG GGCGCGGGCG GATCGCGGCG GGGGCGGGGA CCGACCACGC GGACGGGGTG
TCCGATGTGG ACGGTGTGCT GCGCGCGTAC GCCGAGCAGG TCGAGTTCGT GCAGTCCACG
GGCGCGCAGG TCGTCGTCAT GGCGAGCAGG CAGCTGGCGC GCGTCGCCAC GTCGGCGCGC
GACTACCGGT GGGTCTACGA CCGGCTGCTG CCGCAGGTCG AGCGGCCGGT GATCCTGCAC
TGGCTGGGCG CCGCGTTCGA CCCGAGCCTG GAGGGCTACT GGGGCGGCGC GGACGTCGGT
GAGGCCACGG AGGCGTTCCT GGAGCTGGTG CACGAGCACC GGGACCGGGT CGACGGGGTC
AAGGTGTCGC TGCTGGACGC CGGGCACGAG CGGGCGCTGC GCGCCGCGCT GCCGGAGGGC
GTGCGGCTGT ACACCGGCGA CGACCACCAC TACCCGGAGC TGATCCTGGG CGAGGACGGG
CGGGCCAGCG ACGCGCTGCT GGGGGTGTTC GCGGCGATCG CGCCCGCCGC GTCGGCGGCG
TTGCGCGCCC TGGACGAGGG GGACACCGCG ACCTACCTGG CTCAGCTGGA GCCCACGCTG
CCGTTGGCGC GGCACGTGTT CGCGCCGCCG ACGTTCTACT ACAAGACCGG GATCGCGTTC
CTGGCCTGGA TCAGCGGGTT GCAGCCGGGG TTCACCATGG TCGGCGGGCT GCACAGCGCG
CGGTCCGTGC CGCACCTGGT GCAGGCGTTC CGGCACGCGG ACGCCGCCGG GCTGCTGCCC
GACCCGGAGC TGGCCGCGCA CCGGGTGGCG CTGCTGCTCG ACGCGGCGGG GGTCGCCCGG
TGA
 
Protein sequence
MSAKVVLPGG RVHVLREPVA RVVSAEPFLT RVAFAAAHVV ADPLGDNTPG APAAIDWDAT 
LAFRRHLWAH GLGVAEAMDT AQRGMGLDWA ACRELIRRSA AEAGRGRIAA GAGTDHADGV
SDVDGVLRAY AEQVEFVQST GAQVVVMASR QLARVATSAR DYRWVYDRLL PQVERPVILH
WLGAAFDPSL EGYWGGADVG EATEAFLELV HEHRDRVDGV KVSLLDAGHE RALRAALPEG
VRLYTGDDHH YPELILGEDG RASDALLGVF AAIAPAASAA LRALDEGDTA TYLAQLEPTL
PLARHVFAPP TFYYKTGIAF LAWISGLQPG FTMVGGLHSA RSVPHLVQAF RHADAAGLLP
DPELAAHRVA LLLDAAGVAR