| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4001 |
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| Symbol | |
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| ID | 8328194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 4683398 |
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| End bp | 4684051 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644944474 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003101711 |
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| Protein GI | 256378051 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.380782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGCTGC GGGTGCTGAT CGCCGACGAC CAGACGTTGG TGCGCACGGG TTTCCGGCTG
ATCCTGGACG CGGAGGACGA CATCGAGGTC GTCGCCGAGG CCCCGGACGG CGAGGCGGCG
GTGCGCCTGG CCAGGCAGCT GCGGCCGGAC GTGACGCTGA TGGACCTGCG GATGCCCAAG
GTCGACGGCA TCCGGGCGAC GGAGCTGCTG GCGGGTCCGG GCGTGCCGGA CCCGCTGCGG
GTGGTCGTGG TGACCATCTA CGACCTGGAC GAGAACCTGC ACGCCGCGCT GCGGGCGGGC
GCGTGCGGCT TCCTGCTCAA GGACGCCGGA CCGCGCCTGC TGGTGGAGGC GGTGCACGTG
GCCGCGCGCG GCGAGTCGCT GGTGTCGCCG CAGATCACCA CGCGCCTGCT GCGCGACTTC
GCCCGCGACG GCGGCCCCCG CACCCGCCCC ACGACCCCGA CGCCGCTGAC GGCGCGCGAG
CTGGACGTGG CGCTGGCGGT GGCCAGGGGC GGCACGAACG CGGAGATCGC GCAGCGCCTG
TCGATCACCC TGTCGACGGT GAAGTCGCAC CTGACGAGCG TGCAGCAGAA GCTGGGCGCC
CGGAACCGCA CCGAGGTGGC GATCCGCATG TGGGAGGACG GCCTGGTCCG CTGA
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| Protein sequence | MALRVLIADD QTLVRTGFRL ILDAEDDIEV VAEAPDGEAA VRLARQLRPD VTLMDLRMPK
VDGIRATELL AGPGVPDPLR VVVVTIYDLD ENLHAALRAG ACGFLLKDAG PRLLVEAVHV
AARGESLVSP QITTRLLRDF ARDGGPRTRP TTPTPLTARE LDVALAVARG GTNAEIAQRL
SITLSTVKSH LTSVQQKLGA RNRTEVAIRM WEDGLVR
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