Gene Amir_3975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3975 
Symbol 
ID8328168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp4659383 
End bp4659994 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content74% 
IMG OID644944449 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003101686 
Protein GI256378026 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCGCC CCCGCAAGTT CGTCGAGCAC GAGGTCGTCA GCAGCGCGAG CGAGGTGTTC 
GCCGCGAACG GCCTCGCCGC GACGACGCTG GACGACCTGG TGCGGGCGAC CGGGCTGGGC 
AAGCAGAGCC TGTACAACGC GTTCGGCGGG AAGAAGGAGC TGTTCCTGCG CGCGCTCTCG 
GAGGACCGCG CGGAGGCGGC GCGGGCCGTG TCGGAGGCGC TCGGGCACGG CGACGCGTCC 
CCGGTGGAGC GCATCCGGGG GCACATGCTC GGGCTGGCGA TCGAGTTCAG CCGGGGCGAC 
AGCCGGGTCT CGCTCACCAC GCGCGCGCTC GTCGAGTCGT CCGGGGAGCC GGACCGGCTC 
TCCGAGGTCA CGAAGGAGGG CGTCGAGCAG CTCGCCGGGA TCTACGCGCG GTGCCTGGAG 
CACGCGCGGG AGAACGGCGA CCTCCCTGCG GACGCGGACG TGGACTCGCT GGCCATGTAC 
TTCGTCGCCG TCACCAAGGG GATGGAGCTG CTCGGCCGCA CGGGCGTCGG CCGCGCCGCG 
CTGACGGCGG TCGCGCTCGA CTCGCTCCGC GCGCTCGGCG ACCGGCCCGC GACGGACCCG 
ACCTCGGCCT GA
 
Protein sequence
MARPRKFVEH EVVSSASEVF AANGLAATTL DDLVRATGLG KQSLYNAFGG KKELFLRALS 
EDRAEAARAV SEALGHGDAS PVERIRGHML GLAIEFSRGD SRVSLTTRAL VESSGEPDRL 
SEVTKEGVEQ LAGIYARCLE HARENGDLPA DADVDSLAMY FVAVTKGMEL LGRTGVGRAA 
LTAVALDSLR ALGDRPATDP TSA