Gene Amir_3916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3916 
Symbol 
ID8328109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp4595289 
End bp4596419 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content73% 
IMG OID644944396 
Productperiplasmic binding protein 
Protein accessionYP_003101633 
Protein GI256377973 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.225545 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGTGGT GGAGCTTGTC CACGACAGGC CACAGCGCGG TGGCTCGCCC CTGGCGCGCC 
CGCAGCAGAC CGCTCGCGGC GGCGCTGCTC TTGTCGTCCG CCCTGCTCAC CGGGTGCGCG 
ACGGGCGTCC AGGGCGGCGT CACGGATCAG CCCGACCCGT CCGGCCACTA CCCGGTGACC 
GTGGAGAACT GCGGTCGCGA GGTCACCTTC GACCGCGCGC CCGGCCGCGT CTACCTCGGC 
TTCCAGTCCG CCGCCGAGGT CTTCTTCGGG CTCGGCCTGG GGGAGCGGGC CATCGCGCAG 
ATCACGCCGG TGGACACCCC GCTGCCCGAG CAGGCCGCCG ACTTCGACCG CGTCCCGGAC 
GAGTCCCCGG ACAGCTACGT GCCGGTGGGC AAGGAGCAGA TGTTCGGGCT GCGCCCGGAC 
CTGCTGCTCG CCTACGTCAA CTCCGAGTAC GGCGGCCCCG ACCAGCTCGC CCCCGGACTG 
GCCACGGTGG ACGACCTCCA GGCCATCGGC GCGCGGGTCT ACGCCCTGGT GTGCCCCGAG 
GACACCCCGG TCCGCACCGG GTTCACCTAC CGCGCGCTCA CCGACCTCGG CGCGATCTTC 
GACGTCGAGG AGCGGGCCGC CGAGGTGGTC GACTCGATGA AGGCCCGCAT CGCCGAGGTG 
CAGCGCCGCG TCGCCGGCCG TGAGCCGGTG CCGGTGTTCT ACTACTACGG CGGCGAGGGC 
CCGATCATGA CCGGCACCCG CGACGCCTTC GTCAACGAGG TGATCGCGCT CGCGGGCGGG 
TCGAACGTCT TCGGCGACAC CGGGGGCGGG CGCCGGGGAT TCCTGGACGT CTCCCAGGAG 
CGCGTGGCCG CCACCGACCC GGCCGTCTTC CTGATCGGCG CCAGTCCGAA CGACGACAAG 
GACCTCGCCG CGAAGACCGA CTACCTCTAC CGCACCTTCC CGCAGCTGAA GGCCAGCAAG 
GACAAGCGCA CCGCGCTGAC CTACGACACC GCGAACACGC CCGGCTGGCG CTTCGTGGAC 
GTCGTGGAGG ATTTGGCCCG CACCCTGCAC CCGGACGCGT TCGACGCCGA ACCGCCGACC 
AGCGCCCCGC CGACCAGCGC CCCGCCCACG AGCGCCACGG GGGAGCGATG A
 
Protein sequence
MRWWSLSTTG HSAVARPWRA RSRPLAAALL LSSALLTGCA TGVQGGVTDQ PDPSGHYPVT 
VENCGREVTF DRAPGRVYLG FQSAAEVFFG LGLGERAIAQ ITPVDTPLPE QAADFDRVPD 
ESPDSYVPVG KEQMFGLRPD LLLAYVNSEY GGPDQLAPGL ATVDDLQAIG ARVYALVCPE 
DTPVRTGFTY RALTDLGAIF DVEERAAEVV DSMKARIAEV QRRVAGREPV PVFYYYGGEG 
PIMTGTRDAF VNEVIALAGG SNVFGDTGGG RRGFLDVSQE RVAATDPAVF LIGASPNDDK 
DLAAKTDYLY RTFPQLKASK DKRTALTYDT ANTPGWRFVD VVEDLARTLH PDAFDAEPPT 
SAPPTSAPPT SATGER