| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3880 |
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| Symbol | |
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| ID | 8328073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 4548399 |
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| End bp | 4552574 |
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| Gene Length | 4176 bp |
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| Protein Length | 1391 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644944367 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_003101604 |
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| Protein GI | 256377944 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2268] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTCGCAC TGCTGCGCAG CGCGGGTGTC GTGGTCAGCG CGCAGGCGGA GATCGCGCTG
CTGGGGAGTG ACGAGGACGT CCGCAGGTTC CTCACCGAGG CCCTGCCCCT GGCCCAGGAA
TCCGATGACC GGATCGCCGC GCAGCGGATG CTGAGCACGG GCGGTCCGTC GACGCGCGAC
GCCGCGAACC GGGCGCTGTC GGGATCCATC ACCGACGTCC GGGCGTTCCT GGTGACCGGG
TGGAAGGCCC CGTGGCGTGA GGACCTGCGC ATCCAGGTGC AGCGCCTGCT GAATTCGGCG
GCTGGTCCCA CCGTCCGCCA GTTCGCGAAC GACGCGCTCA ACGGCGGTGA GACCGAGCTG
CTCGCGTTCC TGGAGACCAG GTGGCAGTTC GCGCGGAACG ACGACGACCG CATCGCCGCG
CAACGCATCC TGAACACGGG CGGTCCCGCG GTGAAGCGCG CCGCGAACCT CGCGCTGTCG
GGTTCCATCG AGGACGTCAG GGAGTTCCTG GCCACTGGCC ACGCGGTCGC CATGCAGCGG
GACCAGGAGG TCACCTCCGT CGCGCAGCTC GCCACGGCGG CCCAGAACGC CTCGGCACGG
GCGGACGCCT TCAGGCAGAC CGCGGAGGAC GAGGCGGGCA AGGCCGTGAC AGCGGCCGAG
AACGCCAAGC GCGCGGCTCA GACGGCCGCC GAGGAGACCC GCCAGGCCAA GGGGTCCGCG
ATCGTCGCCG CGGCTGCCGC CAGCCGCGCG GCCGACGCCG CGAACCGCGC GGCGGATGCC
GCGCAGGTCG CGATCAACGC CATCGGCCAG GCGATCTCGG CGGCTGGTGA GGCCGCCAAC
GCCGCTTCCC AGGCCGCGTG GGCCGCGTCG AAAGCCGGTG ACGCGGCCTC ACGGGCGCGC
GAGGCCGCCG CGAACGTCTC CGCGGGGCGC GCCCCCGCAG AGCAGGCGGC CACAGCCGCC
AAGTCGGCCG CGGAAGCCGC CCAGGGAGCC AAGGACGTCA CCAACGCCAT TGTCCAGGCA
ATCCTGGCGG CCCAACGGTT GAGCAAGATC GCCGACTCCC TCACCTCCGT GAGCGACAAC
GTCACCGCGG CCTCGAACGC CGCGGGCGAA GCCGAGCAGT GGGCAGGCCA GTCCGGTGTC
GCGGCGGGAG CGGCGCGCAG CGCGGCCGCC CGCGCCCAGC GCAACGCCAC CGAGGCGGCC
CGAGCGGCGG GCGTCGCCAG GTCGCTGGCC ACCGAGGCTG CCAGCCAAGC CGAAAAGGCA
CGCCAGGCAT CGGTGGACGC GGCCGTGCAC GCGAGCAACG CGGCAGCGGC CGCCGACGAG
GCGGCGCGCC AAGCCGGGCA GGCCAACGAG GCCGCCGCAC GTGCGCAAGC CGCCGCCGAC
GCGGCTCGCC AGGCGTCCGA CACCGCGCGG AACGCGGCGG ACCAAGCCGC GAAGACCGCC
GAGATCGCCC GCAAGGCCGA CTCGGAGAGG CTGACCGCGA ACACGAACCA GGCTGTCCGG
GACGCCCAGG ACGCCTTGCA GGCGGAGACC GACGCCCTGC GCACCCAGGT CAAGCAGTGG
GAAGCCGGGA AGGTCTACCG GCCCGACACC GACACCCAGG GGCTCCTGGA CAAGGCCCGT
TCGGCAGGGG CCGACGGCGT GCCGGACGGG CGCAAGGCGG CACTGCGGTT GTGGCGCAGC
GCGGGGCCCT ACACCTCCGA CGCGGCCGGC TCCGCCCTGT CCGGGGACGC GGCGGCGGTG
ACGGCGTTCG TCACCTCGGG CCTCGATGCG GCGCTGCGCC AGGACGACCG CCTGGGAGCG
AAGATCCTCG GCGGCAACGC AACGGGGGCC TCGGCGGTGG TGGCCGCGTT CAACGCGGTG
ACCGGCACGG ACGAGCAGGC GACCGAGTTC CTGCGCACCG GCGCCTACAA GGGCAAGGAC
GACGAGGACC GCATCGCCGC TCAGCGGATC CTCAACACGG GTGGTCCCGC GACCAGGGCG
GCGGCCAACA CCGCGCTGTC CGGGTCGATC GAGGACGTCA GGAACTTCCT CGCCGAAGGC
CGGTACCAGG CCGCGCGGGA CGACGACCGC ATCGCTGCCC AGTGGCTCGT GAACAGCGGC
GGTCCCGAGG TGAAGGCCGC CGCTCAGGCG TCCCTGTCCG GTCCTGGATC CCACGTCCGC
GACTTCCTCC GGGTCGGGCA GCACAAGGCC GCCCAGCGCG ATGCCGAGAA CGCGCACCAC
GTCGCGATCG TCAACGGGTA CGTCGCCGCC GCGGGCCAGG CCGCGGCAAC GGCGAGCCAG
CACGCCGCGA ACTCCGCGCA GAGCGCGGCC ACCGCCCGTG GCGCGGCGGC CGAGGCCGAC
CGCTGGTCCG ACGAGGCCCG CAATTCCGCC GCTAGGGCCA AGGTCTACGC GGACCAGGCC
GCCGCCGCCG CGGAGCAGGC TTCCGGTTCG GCCGCACGGG CGGCGCAATC CGCCCGGACC
GCGCAGGCCG CGGCTGCGAC CACGCGCGAC TACGCCGACG CGGCGAACCG GTCAGCCGCC
CAGGCAGGAC TCTCCGCCGT CCAGGCGTCG AAGTCCGCAG GTGAGGCCCG CGAGTCCTCG
GACCGGGCGC AGGTGGATGC CCAGGCCATC GGCAAGGCGT ACGACCAGGC CCTCCTGGCC
CGCTACGAGG CCGAGTGGGC GCTGGCGGAG AAGAAGGACC TGGCAGGCGC TCGCAACGAC
ATGCGGGACA GCAAGGCCGC CATCACCAAG CTCCGCGACA ACGTCGAGCA CGCGCTCAAG
AACACGGGGC TGCCCGACGA GACCAGGCGG CAGCTGGAGG AAACCCTCGG CAAGCTCACG
CACCTGCTCG ACCTGCTGGG CAAGGGCGCC TCCGCCGACC TGAACGTCGT CAAGTCGGCG
CTCGCCGACA TCGTCGCCTT CGGCGCGCAA TCCCGCATCA CCCTTCCCGA CTACCCCGAG
GCCATTCCCG ACGAGGTGCG CAAGGCCGAC GTCGGGGTCA GGAAGGAATG GCTCTACCAG
CGCTGGCTGA CCCTGCGCGA CGCCCCCAAC CAGGCGGAGA AGGCAGCCCG GTTCGGCGCC
GCGTACTGCA CCGAGTTCAT CAACGACGGC GCCTGCTCGG CAGAGGTGGC CTCGCTGGGC
GAGTACGCGT TCGAGGTCGC CCTGCTCCTG TTCCCCTACG GCCGCCTGGC CAAGTGGGTC
GGGGAGACGG GCTACACCGC GCTCGCCGCC AGGGGCGCGT TCGGCAAGGC GCTCCAGGAA
GCGGCCCTGA GCAGCAAGTT CCTGCCCGGT GTCCCCGTCG GTTCCAGGGC GCTCGCCGTG
CTGCCCGCCG TGGAGCGGGC GAACTCCCGT GCCGCCGCCT GCCTGCCGGG GAACAGCTTC
ACCGAGGGCA CCCGCGTGCT GATGGCCGAT GGAAGCGCCA AGGAGATCGA GCGGGTCGAC
GTCGGTGACG TCGTCGCGGC CACCGACCCC GAGACCGGTG TCACCGGCAC CAGGCGGGTC
ACCACGACCA TCGTGGGGAC GGGGGTCAAG CACCTCGTGG ACATCGTGGT CGCCACCGAT
GGGCACGGCG GCACAGCGGT CATCACCGCG ACGGACAACC ACCCGATCTG GGTGGACGAC
CGGCACGCCT GGATCGGCGC GGGACAGCTC ACCGCAGGGG ACCAGCTCCG CGACCACGAC
GGCGGCGGGC ACACCGTCCG GAAGGTGGTG CCGCGAACCG AGGTCGCCAC CGTCCGCAAC
CTCGGCGTGG CCGACGTGCA CACCTACTAC GTGCTCGCCG GGGACACCAC GGTCCTGGTG
CACAACGAGG GGTGCCAGAC CTGGCCCAAC CTCATGAAGA ACAGCCTGGA CCAGGAGCTG
GCCTTCGCCG ACCGGCTCGG CGTCAAGCCC GCTGCTCCTG GCACGGCCGC GTTCGACGCG
GCGCTCAGCA CCGGGGAGAC CGTCAAGTGG GCCGTGCGCC TGGACGGGAG CCTGGTTATC
GTGCCCAAGA ACGTCGTCGG CGCGGGAGAG ATCTCGCACA CCGTTCTCAC GAGGGGGGAG
TCGGTGCTCG CAGCGGGCGA GGCCTCGATC GTCGGCAGCG CCGACGCAGG CTACTTCGGA
CTGGAGATCA CCCGCCACAG CGGACACTTC CAGCCGGGGC CGGAGACCCT GCAGATCGGC
TTGGACGCGT TCGCCGCGGC GGGGGTGAAG TTCTGA
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| Protein sequence | MFALLRSAGV VVSAQAEIAL LGSDEDVRRF LTEALPLAQE SDDRIAAQRM LSTGGPSTRD
AANRALSGSI TDVRAFLVTG WKAPWREDLR IQVQRLLNSA AGPTVRQFAN DALNGGETEL
LAFLETRWQF ARNDDDRIAA QRILNTGGPA VKRAANLALS GSIEDVREFL ATGHAVAMQR
DQEVTSVAQL ATAAQNASAR ADAFRQTAED EAGKAVTAAE NAKRAAQTAA EETRQAKGSA
IVAAAAASRA ADAANRAADA AQVAINAIGQ AISAAGEAAN AASQAAWAAS KAGDAASRAR
EAAANVSAGR APAEQAATAA KSAAEAAQGA KDVTNAIVQA ILAAQRLSKI ADSLTSVSDN
VTAASNAAGE AEQWAGQSGV AAGAARSAAA RAQRNATEAA RAAGVARSLA TEAASQAEKA
RQASVDAAVH ASNAAAAADE AARQAGQANE AAARAQAAAD AARQASDTAR NAADQAAKTA
EIARKADSER LTANTNQAVR DAQDALQAET DALRTQVKQW EAGKVYRPDT DTQGLLDKAR
SAGADGVPDG RKAALRLWRS AGPYTSDAAG SALSGDAAAV TAFVTSGLDA ALRQDDRLGA
KILGGNATGA SAVVAAFNAV TGTDEQATEF LRTGAYKGKD DEDRIAAQRI LNTGGPATRA
AANTALSGSI EDVRNFLAEG RYQAARDDDR IAAQWLVNSG GPEVKAAAQA SLSGPGSHVR
DFLRVGQHKA AQRDAENAHH VAIVNGYVAA AGQAAATASQ HAANSAQSAA TARGAAAEAD
RWSDEARNSA ARAKVYADQA AAAAEQASGS AARAAQSART AQAAAATTRD YADAANRSAA
QAGLSAVQAS KSAGEARESS DRAQVDAQAI GKAYDQALLA RYEAEWALAE KKDLAGARND
MRDSKAAITK LRDNVEHALK NTGLPDETRR QLEETLGKLT HLLDLLGKGA SADLNVVKSA
LADIVAFGAQ SRITLPDYPE AIPDEVRKAD VGVRKEWLYQ RWLTLRDAPN QAEKAARFGA
AYCTEFINDG ACSAEVASLG EYAFEVALLL FPYGRLAKWV GETGYTALAA RGAFGKALQE
AALSSKFLPG VPVGSRALAV LPAVERANSR AAACLPGNSF TEGTRVLMAD GSAKEIERVD
VGDVVAATDP ETGVTGTRRV TTTIVGTGVK HLVDIVVATD GHGGTAVITA TDNHPIWVDD
RHAWIGAGQL TAGDQLRDHD GGGHTVRKVV PRTEVATVRN LGVADVHTYY VLAGDTTVLV
HNEGCQTWPN LMKNSLDQEL AFADRLGVKP AAPGTAAFDA ALSTGETVKW AVRLDGSLVI
VPKNVVGAGE ISHTVLTRGE SVLAAGEASI VGSADAGYFG LEITRHSGHF QPGPETLQIG
LDAFAAAGVK F
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