Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3843 |
Symbol | |
ID | 8328035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 4507191 |
End bp | 4508438 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644944330 |
Product | nucleotide sugar dehydrogenase |
Protein accession | YP_003101568 |
Protein GI | 256377908 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase |
TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0234219 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCCGTTG ATCTCGTCGT GGTGGGGGTC GGCTACGTCG GCCTCCCCCT CGCCGCCGCG GCAGGCGCGG CGGGGTTGAC CGTCGTCGGC CTCGACACCT CGGCCACCGT CGTCGACGGG CTCACCGCGG GCCGCTCGCA CGTCCCCGAC GTCCACGACG CGCGACTGGC GGCCATGCTC GACGCCGGGT TCACCGCCAC CACCGACCCC TCGGTGATCG CGACCGCCGA CACCGTCGTC CTCTGCGTCC CCACCGGCCT CGGCGTCGAC GGCAGGCCCG ACCTGGGCGC CGTGCGCGCC GCCTCGCGGA CCGTCGCCGA CCACCTCACG CCCGGAACCC TGGTGGTGCT GGAGTCCACC AGCTTCCCCG GCACCACCGA CGAGGTCGTC CGGCCGATCC TGGAGAGCGC CGGCCTGGTC GCGGGCGAGG ACTTCCCGCT CGCGTTCTCC CCCGAGCGCG TCGACCCCGG CAACCGCCGC TACGGCATCA CCAACACCCC CAAGGTCGTC AGCGGCCACA CCCCGTTGTG CGCCAAGCAC TGCGCCGCGT TCTACGGCCG GTTCGTCGAC ACCCTCGTGG TCGCCAGGGG CACCCGCGAG GCCGAGATGG CCAAGCTGCT GGAGAACACC TACCGGTACG TGAACATCGC GCTGGTCAAC GAGATCACCG TGTTCTGCGA GCGGCTCGGC CTCGACGTGT GGGACGTGCT GCACTGCGCG GCCAGCAAGC CGTTCGGGTT CATGCCGTTC TCGCCCAGCG CGGGCGTCGG CGGCCACTGC ATCCCCGTCG ACCCGCTCTA CCTGCTCGAC CTGGCCCGCC GCGAGGGCGC GGGCCTGAGC CTGGTGGAGG CCGCGCTGCG CGTCGACGCC TCCATGCCCG GCTATGTCGT GGACCGCGTC GAGCGGATGC TCGCAGGCCA CGGCAAGCCG CTCGACGGCG CGCACGTCCT GCTCCTGGGC ACCGGCTACA AGCCGGACGT GCCCGACACC CGCGAGTCGG CGGCCCCGAA GGTCGCCGCC CGCCTGCACG CGCGCGGGGC CGCGGTGTCC TACCACGACC CGCTCGCCGC ACCACTGCCG GAACTCGGGC CACCCGTGCC CGACCTGGAC TCCGCCGTGC GCGACGCGGA CCTCGTGGTC CTGCTCGTCG CCCACGGCGG GTACGAGCTC GGCCGTCTGG CCAGGAGGGC GCGCCTCCTG CTGGACGTCA CCGGCCGAGT GCCGGGCATC GCGGTCCAGC GCCTCTAG
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Protein sequence | MSVDLVVVGV GYVGLPLAAA AGAAGLTVVG LDTSATVVDG LTAGRSHVPD VHDARLAAML DAGFTATTDP SVIATADTVV LCVPTGLGVD GRPDLGAVRA ASRTVADHLT PGTLVVLEST SFPGTTDEVV RPILESAGLV AGEDFPLAFS PERVDPGNRR YGITNTPKVV SGHTPLCAKH CAAFYGRFVD TLVVARGTRE AEMAKLLENT YRYVNIALVN EITVFCERLG LDVWDVLHCA ASKPFGFMPF SPSAGVGGHC IPVDPLYLLD LARREGAGLS LVEAALRVDA SMPGYVVDRV ERMLAGHGKP LDGAHVLLLG TGYKPDVPDT RESAAPKVAA RLHARGAAVS YHDPLAAPLP ELGPPVPDLD SAVRDADLVV LLVAHGGYEL GRLARRARLL LDVTGRVPGI AVQRL
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