| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3766 |
|---|
| Symbol | |
|---|
| ID | 8327958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 4429822 |
|---|
| End bp | 4431537 |
|---|
| Gene Length | 1716 bp |
|---|
| Protein Length | 571 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644944256 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_003101494 |
|---|
| Protein GI | 256377834 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.102258 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAGGACC GCACGATCGC AGATCGCTAC CGGTTGACGG AGCGGATCGG CGCAGGTGGC
ATGGGCGTGG TCTGGCGCGC CCAGGACCAG CGGTTGCACC GCGTAGTCGC CGTCAAGGAA
CTGCGCCCCG GAATCGCGTT CGACGAGGCC TACACCGAGC GGGCGATCCG CGAGGGCCGG
ATCGCCGCAC GGCTCCAGCA CCCGAACGTG ATCGCCCTCT ACGACGTGGT CGAGCACGAC
GACCGGCCGT GGCTGATCAT GGAGTACCTG CCGTCCAAGA GCCTGGCGGC GCTGCTGTCC
GAGCGCGGCA GGCTGCCCGC CGACGAGACC GTGCGGCTGG GCATCCAGCT CGCCTCCGGG
CTCGTCGCCG CCCACCACGC GGGCGTGGTG CACCGCGACG TGAAGCCGGG CAACGTCCTG
GTGACCGAGT TCGGCACGGT CAAGATCACC GACTTCGGCA CCTCGCGGGC CGCCGACGAG
GTCACGATGA CCGCGTCCGG GCTGCTGATC GGCACGCCCG CGTACCTCTC GCCCGAGGTG
GCGCGCGGCG GGCGGGCCGA GTTCCCGGCG GACGTGTACG GGCTGGGGGC GACGCTGTAC
GCGGCCGTCG AGGGCGGGCC GCCGTTCGGC ACGGACGCCA ACACGATCGC GATGCTGCAC
CGGGTCGCCG AGGGCAAGTA CGCGCAGCCC GAGCACGCGG GGCCGCTCGG GCCGGTGCTG
AACCGGCTGC TGGACGTGGA CCCGGCGACC AGGCCGACGA TGACCGAGGC GGTGCGGCTG
CTGCGCGAGG TGCGGCCGGA CTCCTCGCCC ACGGCGGTCG TCGCCGCGCC CGCCGGGACC
ACGGTGATCG CGGAGCCCGC CGTGGACGCG CTGCCCGCCG AGGCCGCGGC AGGCGCGGCG
GCGGGGGCAG CCGCGGTCGC CGCCGCCGCC GACATCGCCC AGTCCACGCC GCAGCCGACC
AAGGTCGACG ACCTGGCGGC GGCCCCGGCG GAGCCGGAGC GGGCGGCGGA ACCGGAGCAG
CGCCACCCCC CGACCGTCGT GGACGAGCCC GCGACGGCGT TCACCCCGGC GCCGCCCACC
CCGTACGTGC CGCCGCGCCC GCAGTACCGG ACGCAGCCGG ACCAGCCGGA GGAGGAGGGT
GGCGGGCGCA AGGTGCTGCC GATCGTGGCG CTCGCGCTGG CCACGCTGGT CATCGCCACG
CTCGTCACGT ACCTGGTGAA CCAGTCGGGC CAGGACGACC AGGCGGTCAC CCCGCCCCCG
CAGACCACGG TCACCACCGA GGTGACCGGC GGCGAGCAGC CCGGCGGCCA GGACACCGGC
GCGGGCGAGC AGAAGCCGAC CAGCGACACC CCGTCGTCCC CGCCCGCCCA GAGCTCGTCC
GCGCCGCCGC CGCAGACCAG CACCCAGGAG CAGCCGCCCC CGCAGCAGAC CGCGCCGGTG
GACCAGGGGC TGCGGGACTA CTACTCGCTG CTGCCGGGCA ACACCGAGGC CGGGTACGCG
AGGCTGACGG ACAACTTCAA GGCGGGGCGC GCGGGCACCT ACCAGGGGTA CGCCGGGTTC
TGGCAGACGA TCAGCTCGGT GTCGTTGACC GACGTGCAGG TCGTCGGCCC GAACCAGGTG
CGCGCGACCG TGGTCTACAA CGGCGGCTCG CGCGAGACGA ACACCTTCAC CCTGGTCCAG
TCGAACGGCC AGTGGCTGAT CGACGGCCAG TCGTAG
|
|---|
| Protein sequence | MEDRTIADRY RLTERIGAGG MGVVWRAQDQ RLHRVVAVKE LRPGIAFDEA YTERAIREGR
IAARLQHPNV IALYDVVEHD DRPWLIMEYL PSKSLAALLS ERGRLPADET VRLGIQLASG
LVAAHHAGVV HRDVKPGNVL VTEFGTVKIT DFGTSRAADE VTMTASGLLI GTPAYLSPEV
ARGGRAEFPA DVYGLGATLY AAVEGGPPFG TDANTIAMLH RVAEGKYAQP EHAGPLGPVL
NRLLDVDPAT RPTMTEAVRL LREVRPDSSP TAVVAAPAGT TVIAEPAVDA LPAEAAAGAA
AGAAAVAAAA DIAQSTPQPT KVDDLAAAPA EPERAAEPEQ RHPPTVVDEP ATAFTPAPPT
PYVPPRPQYR TQPDQPEEEG GGRKVLPIVA LALATLVIAT LVTYLVNQSG QDDQAVTPPP
QTTVTTEVTG GEQPGGQDTG AGEQKPTSDT PSSPPAQSSS APPPQTSTQE QPPPQQTAPV
DQGLRDYYSL LPGNTEAGYA RLTDNFKAGR AGTYQGYAGF WQTISSVSLT DVQVVGPNQV
RATVVYNGGS RETNTFTLVQ SNGQWLIDGQ S
|
|---|
| |