Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3648 |
Symbol | |
ID | 8327838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 4262325 |
End bp | 4263176 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644944139 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003101379 |
Protein GI | 256377719 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.783622 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCCAGC ACCTGCACCT GCCGCCGCCC GTGATGAAGG TCGTCCTGGG CAACGAACTC GCCCGCCTGC GCAGCGCGGC GGGGGTGACG CAGGAGGAAG CGGCCGAACT GCTCGGCTGC ACGCAGCAGA AAATCGCGCA CGTCGAAGCG GGCAGCGGGA TCAAGCTGAT CGAGCTGAAC GCCCTCCTGG ACCGGTACGG CGCCGAGGGG CCGGACCGCT CCTACGCCCG CGACCTCCAG TCCGAGGGCA ACCGCCGGAC GAAACGTGGC GCGTTCAGCA CCAGGTTCCG GCAGTACCTC CGCCTGCTGG TCGACATGGA GCCCAGCTGC GACCGCTACT TCTCCTACCA GGCCCTGGTG GTGCCCGGCC TGCTGCAGAC CGAGGACTAC ATGCGGCGCA ACGCCAGGGC GTGGCGACCG TCGCTGCCGC TGGCGGAGAT CGACGAGTAC GCAGCGAACC GGCTGGCCAG GCAGCGCGTC CTGGAGAACC CCGAGCAGCG GTTCTGGTTC ATCCTCGACG AGGCGGCCCT GCGGCGCACC GAGGGCGGAC CGGTGATGAG GGCGCAGGTG GAGCACCTGG TGGAGCTGAT CGACCGCCCG AACGTGGAGA TCCAGGTCGT GCCGTTCGAG GTGGGCTTCT ACATGGGCCA GGGGCACGAC TACACCATCT TCGGCTACGA CACGCGCCCG GCGGTTGACA TCATCTACGT CGAGCGGCAC GACGGCGGCG AGTACATCGA CAACGGGAAG CGCGCGGCGG GCTACCAGAC GCTCTGGGAC CACCAGAGAG CTGCCGCCAG CGGACCGGAG CAGACCCGTC GCCTGCTGCT CGACCTCGCG GCGTCGCTGT AG
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Protein sequence | MTQHLHLPPP VMKVVLGNEL ARLRSAAGVT QEEAAELLGC TQQKIAHVEA GSGIKLIELN ALLDRYGAEG PDRSYARDLQ SEGNRRTKRG AFSTRFRQYL RLLVDMEPSC DRYFSYQALV VPGLLQTEDY MRRNARAWRP SLPLAEIDEY AANRLARQRV LENPEQRFWF ILDEAALRRT EGGPVMRAQV EHLVELIDRP NVEIQVVPFE VGFYMGQGHD YTIFGYDTRP AVDIIYVERH DGGEYIDNGK RAAGYQTLWD HQRAAASGPE QTRRLLLDLA ASL
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