Gene Amir_3619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3619 
Symbol 
ID8327809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp4235952 
End bp4236938 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content73% 
IMG OID644944114 
Productprotein of unknown function DUF470 
Protein accessionYP_003101354 
Protein GI256377694 
COG category[S] Function unknown 
COG ID[COG2898] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCACCA CCGACGACGC GGAGATCCTC GCGTCGCTGC GCGAGCACAG CGACCACCCG 
AGCGGTTTCC TCGCCTACAA CGGGAAGACC TCGCACTTCC GCGGCGAGAA CGTCCCCGGC
ACGGTCGCCT ACCGCAGGGG CCGCCGCCAC GTCGTGCAGC TGTGCGGACC GCTCACCGGC
GCCGAGCACC GCGCCGCGCT GCTCGCGCAG TTCCGCGCCT GGGCCGCGTC CGAGCGGCTG
CGGATCTGCG CCGTGCAGCT CTCCCGCGCC GACGCCGAGC TGTACGCGGG GCAGGGCTTC
GCGGTCAACC AGCTCGGTCG CACCTACAGC GTCGACCTGG CCGCGTTCAC CACGAAGGGC
GGACCGCTCG CCAAGGTCCG GCAGAACATC GCCCGCGCCA AGCGGGACGG CGTCACCGTC
GCCGAGAGCG CCTCCCAGGA CGACCCGAGG CTGTCCGAGA TCGACGCGAG GTGGTTGCGC
GCCAAGGGAA GGCACGTCAA GGAGCTCGAC TTCATGATCG GCGAGCGCGG CGGCCGGGGA
GCCGCCCACC GCCGGATCTT CGTCGCGAGC GTCGGCGAGC GCCCCGTCGC CTACATCTCC
TACTCCCCGG CGTTCGGCGG CAGGCCCGGC TGGCTCTACG ACCTGACCCG CCGCGACCCG
GACTCGCCCG TCGGCACCAT CGAGCTGGTC AACCTCCAGG CGCTGCAGAC GTTCCAGGCC
GAGGGCGCGG GCTGGCTGCA CCTGGGCCAC ACCCCGTTCG CCGGCCTCGA CGCGGCCAAC
GAGGTGCCCG GCGCGGCCAG CGGCGCCGTC ACCCGCGTCG CCGCGCTGAT CGCCGAGCAC
GGCAAGGCGC TCTACCCCTC GCGCACCCAG GAAGCGTTCA AGCGCAAGTG GGCCCCGCAC
GTGGTCGAGC CCGAGTACGT CGCCTTCGAG GGCGGCGTCT CGGTCCCCTC GCTGTGGAAC
CTGCTCCGGC TCACCCGAGC CATCTGA
 
Protein sequence
MITTDDAEIL ASLREHSDHP SGFLAYNGKT SHFRGENVPG TVAYRRGRRH VVQLCGPLTG 
AEHRAALLAQ FRAWAASERL RICAVQLSRA DAELYAGQGF AVNQLGRTYS VDLAAFTTKG
GPLAKVRQNI ARAKRDGVTV AESASQDDPR LSEIDARWLR AKGRHVKELD FMIGERGGRG
AAHRRIFVAS VGERPVAYIS YSPAFGGRPG WLYDLTRRDP DSPVGTIELV NLQALQTFQA
EGAGWLHLGH TPFAGLDAAN EVPGAASGAV TRVAALIAEH GKALYPSRTQ EAFKRKWAPH
VVEPEYVAFE GGVSVPSLWN LLRLTRAI