| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3610 |
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| Symbol | |
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| ID | 8327800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 4223112 |
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| End bp | 4225286 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644944105 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003101345 |
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| Protein GI | 256377685 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGATC TCGAGCTGCC CGACCGGCCC AGGGGCCGCA GACCCCGGCG GCGGGTGCTG
CTCATCGCCC TGTTCGCCGT GGTGACCGCC GTGGTCGCCT CGGTGTCCGC CTGGCTGGCC
GCGGACGTGG GCGAGCGGTG GCGGGCGGGC GACGTCCTCC ACCTGTGCGC GACCGGGGTC
ATGCTGGTGC TCGCCGGGGT GCTGATCACC CTGCTCCCCG GGGCGGTCAA GGAGTTCTGG
CGCTGGTCCG GGGTGTTCGC CGCCGTCGCC GAGCGGGTGA TCAGGGCGCT GCGCCCGCTC
AAGGCCGTCG GCGTGGTCGT CACGGTGCTC GTGCTGGGCG TCGGCGGCTC CCTGCTGGCC
CCGGCTCCCG ACACGGACGC GACCGCGCTG GAGGAGGGCG AGCTGTGGCT CATGGCGGGC
GAGGACCTGA GCCCGAGCGA CCCGCGCGCC GTGCTGCTGG AGCAGTGGAA CCAGGCGCAC
CCCGAGACCC CGGCGAGGCT GGTGGACGCC GCCGGGGCCA CGGACGAGCA GCGGGAGCGG
ATGCTCGACG ACGCCCGCCC CGACGGGCCG CACCGCGCGG ACGTGTACCT GCTGGACGTG
GTGTGGCTGC CGGAGTTCGC GGGCGAGGGG CACCTGCGCG AGCTGGACGG GTCCACGATC
GGCGGCGGCA CGGCCGACTT CCTGCCCGTG GTGCTCGACA CCTGCCAGGA CGGCGGGAAG
CTGTGGGCGC TGCCGCTCAA CACCGACGTC CGGCTGCTCT ACCACCGCAC CGACGTCCCC
GGCCTGGTCG TGCCGACCAG CTGGGACGGC CACTCCGGCT CCGCCGCGAC CAGGGCGCAC
GGCGGGCTGG AGGCGGCCGA CGCGCCGCAG CTGGCCGAGG AGATGCTCAC CGTGGAGGCG
CTGGAGGCGA TCTGGGCGGC GGGCGGCAAC GTGGTCACCC GTGACGGGGA GGTCACCCTG
ACCCCGGACG GGAGCAGGGT GCAGTTCACC GAGGACGACT ACGAGGGGAT GCGCAAGCTC
AACGCGATGG CCAGGACCGA GGGCGTGGTG CCGCGGGGCG TGCGCCCCGA GGAGACCGGG
GCCGAGGACG CGCTCACCCT GTTCGCGGAC GGGCGGACCG CGTTCCTGCG GAACTGGGCC
GTCACCCACC GGCAGCTCAC GGGCAGGCAG GACAGGCCGA GCACGACGCA CGTCGGGTTC
GACAGCGCCG TGCAGCCCGC GCCGAGCGTG CTGGGCGGGC AGGACCTGGC GATCTCCCGG
CACACCGCGA AGCCGAAGGC GGCGAAGGCG CTGCTGGAGT TCCTGACCAG CACGCAGAGC
CAGCAGATCC TGGCCGAGGT CGGCGGGTTC GCGCCGAGCC GGACGTCGGT GTACGAGCTG
TCGGACAGCA GGCACCTGGC GAACGTGCGC ACCGCGCTCA AGGACGCCAG GCCCCGGCCG
AGGACCGAGC GGTACACCGA GTTCAGCAAG CTCTTCCGGG AGGCGGTCGA GAAGGTGGTG
GCGCCGGAGG ACTCGATCCC GGACGAGACC GCGCGGAAGC TGGCGGACGT GCTGCGCGGG
CGATCCGGCG CGGGTGATCA GACGCGGGTG GGGCGGGGGT TTCGCGGCGG GCGGGAACGG
TGTTTCGAAG GGGTTCGAAA GTCCGCTCCG ACGGGCGGTG GGCGCGCCAG GCTGAGGGCC
GACGCACCGA CCGAGACCGT TGGAGTGATG ATGCGAAGGA CCTTGACCGC GTTGTTCGTC
GCCGTCGTGG CGCTGCTGTC GTCGCTGGTG TCCGCGAGCG CGGAACCCGG CTCGGTGGAC
AGATCCGCCA CGCGGGTGGA GGCGCCGGTG ACCGTGGCCG CACCAGTTCA GCAGGACGTG
TCGGCGCAGG CGCTGTCGTG CACGGCGGGC GACCTGTGCG CGTGGAACGG CGTCGGGGGC
GGGAGCCGTT GCAGCTGGAC CAACAGGGAC AACGACTGGT GGTACGCCCC GACCACCTGC
TCGTGGTCGT CGGGCAGCGC GGTGTGGTCC GTCTACAACA ACGGGCGCAA CACCGCCTAC
GACAGGGTGT GCCTCTACCC CGAGGCGAAC TACGGGGGCA GCACCGCGTA CTACGTCCTG
CGGGGGCAGC AGGCCGAGGG GTGGCCTGGC GTGATCATCC GCTCCCACAG GTGGGTCAAC
GGGTCCTGCT GGTGA
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| Protein sequence | MADLELPDRP RGRRPRRRVL LIALFAVVTA VVASVSAWLA ADVGERWRAG DVLHLCATGV
MLVLAGVLIT LLPGAVKEFW RWSGVFAAVA ERVIRALRPL KAVGVVVTVL VLGVGGSLLA
PAPDTDATAL EEGELWLMAG EDLSPSDPRA VLLEQWNQAH PETPARLVDA AGATDEQRER
MLDDARPDGP HRADVYLLDV VWLPEFAGEG HLRELDGSTI GGGTADFLPV VLDTCQDGGK
LWALPLNTDV RLLYHRTDVP GLVVPTSWDG HSGSAATRAH GGLEAADAPQ LAEEMLTVEA
LEAIWAAGGN VVTRDGEVTL TPDGSRVQFT EDDYEGMRKL NAMARTEGVV PRGVRPEETG
AEDALTLFAD GRTAFLRNWA VTHRQLTGRQ DRPSTTHVGF DSAVQPAPSV LGGQDLAISR
HTAKPKAAKA LLEFLTSTQS QQILAEVGGF APSRTSVYEL SDSRHLANVR TALKDARPRP
RTERYTEFSK LFREAVEKVV APEDSIPDET ARKLADVLRG RSGAGDQTRV GRGFRGGRER
CFEGVRKSAP TGGGRARLRA DAPTETVGVM MRRTLTALFV AVVALLSSLV SASAEPGSVD
RSATRVEAPV TVAAPVQQDV SAQALSCTAG DLCAWNGVGG GSRCSWTNRD NDWWYAPTTC
SWSSGSAVWS VYNNGRNTAY DRVCLYPEAN YGGSTAYYVL RGQQAEGWPG VIIRSHRWVN
GSCW
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