Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3553 |
Symbol | |
ID | 8327743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 4127299 |
End bp | 4129158 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 644944050 |
Product | glycosyl transferase family 2 |
Protein accession | YP_003101290 |
Protein GI | 256377630 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0189873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAACCCA GTTCGGTTTC GGGTCTGGTC TCGATCGTCG TGCTCGTCAG GGACCGGGTG GAGCACACCC GCCGGTTGGT CGCCTCGCTG GCGCGCGCCA CCGGCGAGTG GGAGCTGGTC GTGGTGGACA ACGGCTCCAC CGACGGCACC GCCGCGCTGC TCGCCGGGCT CGGCGAGGCG CTGGGGAGGC CGGTGGTGGT GCTGTCCTTC CCGGACGACC GGGGTGGCGC CGAGCGGCGC AACGCGGGGG CCGGGGCGGC GCGCGGGGAG TTCCTGCTGT TCCTGGACAA CGACGTGCTG GTGGACGACG CCGGGCTCGT GGAGGTGCTG GCGGCGGAGC TGGCGGGCGA GCCCCGGCTG GCGGCGGTGT CGCCGCTGCT GTGCTACCCC GGCGAGCTGT CGCTGGTGCA GTGCGCGGGC GGCGGGTCGA CGCCGAACGG GCTGATCGGG CTGGTGGGGC GCGGGCAGCC GGTGTCCGCG CGGCACCGGG AGCGGCGGGA GCAGACGTGG GCGCCGACGG CGGCGCTGAT GGTGCGGCGG TCGGCGTTCC GGGCGGTGGG CGGGTTCGAC GAGGCGTTCG ACCCGGTGCC GCTGTGCGAG GACGTGGACC TGTGCCTGCG GCTGCGGGCG GCCGGTGGGG GCGTGCGGTT CGTGGGGGCG GTGGTGGCGC GGCACTTCGA GGGGACCACG TTCAACCACG TCGGGCACGA CAAGCTGGCG GTGTGGAAGC GGCACACGCG GGTGCTGCGG GCGCGGTGGG CGCGGGAGTT CGCCGAGGGG CCCCGGCACG GGCCCGCGGA GCTGGCGTGG GTGCCGGTGC GCAAGGACTA CCGGGACCTG GACGCGCCCA GGGCCTGGGT GGAGGGCTCC TGGGTGGAGG GCACCGGGGC GGGGAGCGCT GGACCCGCGG GTGCGAGCGG GGGTGCGGGC GGGGCGGTGG GCGGCGCGGG CCCGGTGGTG GACCCCGGTG GTGGCCCGGC GGGTGACGGC GCGGGACTCG GCGCGGCGGA ACCGGGCACG AGGCCCGTGG GCGCGGCGGG TGGGCCCGGC GCCGGGTTCT TCACCAGCGA CCGGGAGCTG GCCGGGCTCG GGCGGGCGGA CGTGCGGGTG TCGGTGCTGG GCGCGCGGGC CTCGCTCGCC GCGCTGGCCG CGACGCCGGG GGTGCGGATC ACCGGGGTGT CCGACCGGGA CGCGGGCGAG CTGGCCCGGC GCTCGCGCGA GCACGGGGTG CGGTGGGCGT TGCGCGAGGA CCGGGACGCC GTGGAGCTGG TGCCCGCCGA GGGGGTCGTG GGCGATCGGC TGGACCTGGC GGAGCTGGCG CTGCGCCGGG GCAGCCACGC GCTGCTGGAG GCGCCGCTGG TGGGTGGTCC GGCTGAGCTC GCGGGGTTGC TGGGGCGGGC GCGGACGGCC GAGGCGCGCT GCTCGGTGCT GCTGCCGTGG GCGCACCACC CGGAGCTGGC CGCGCTCGGC AAGGCCGTCG CCGAGGGGCG GATCGGGGCG CCGACGTCGT TCGTGGCGCG GGTGCGCGCG CCCGGCGGCG ACCCGGCGCT GGACGTGCTG GACGCCGCCG AGCGGGCGCT GGGCGGGCCG GTCGAGCTGG TGGCGGGGCT GGGGCCGACG CGGGCGCGGG TCCGCGTGGC CGGGGTGCCC GGTGTGCTGG AGGCGGGGCG CGGGCCGCGA TCGCTGCGGG TGGTGATCAC CGGTGAGGGC GGCGAGCTGA CCGCCGAACC CCCGTTCGAC GGGCCGGACG GGGCTTTGGC GGACTTCGTG GCGCTGCTGC GCGGCGGCCC GGTGCCGCTG ACGGACGTCG TGGCGCTCGG CCCGGTGCTG GCGGCCCGGC TCGCGTGGGT GACGGCGTGA
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Protein sequence | MEPSSVSGLV SIVVLVRDRV EHTRRLVASL ARATGEWELV VVDNGSTDGT AALLAGLGEA LGRPVVVLSF PDDRGGAERR NAGAGAARGE FLLFLDNDVL VDDAGLVEVL AAELAGEPRL AAVSPLLCYP GELSLVQCAG GGSTPNGLIG LVGRGQPVSA RHRERREQTW APTAALMVRR SAFRAVGGFD EAFDPVPLCE DVDLCLRLRA AGGGVRFVGA VVARHFEGTT FNHVGHDKLA VWKRHTRVLR ARWAREFAEG PRHGPAELAW VPVRKDYRDL DAPRAWVEGS WVEGTGAGSA GPAGASGGAG GAVGGAGPVV DPGGGPAGDG AGLGAAEPGT RPVGAAGGPG AGFFTSDREL AGLGRADVRV SVLGARASLA ALAATPGVRI TGVSDRDAGE LARRSREHGV RWALREDRDA VELVPAEGVV GDRLDLAELA LRRGSHALLE APLVGGPAEL AGLLGRARTA EARCSVLLPW AHHPELAALG KAVAEGRIGA PTSFVARVRA PGGDPALDVL DAAERALGGP VELVAGLGPT RARVRVAGVP GVLEAGRGPR SLRVVITGEG GELTAEPPFD GPDGALADFV ALLRGGPVPL TDVVALGPVL AARLAWVTA
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