| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3531 |
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| Symbol | |
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| ID | 8327721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 4100650 |
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| End bp | 4102914 |
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| Gene Length | 2265 bp |
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| Protein Length | 754 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644944029 |
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| Product | ABC transporter related |
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| Protein accession | YP_003101269 |
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| Protein GI | 256377609 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0114059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAACG CAGCGGACAG CCACGACGCG ATCGAGGTGC GCGGAGCCAG GGAGAACAAC
CTGGCCGACG TCTCGGTCGA CATCCCCAAG CGCAGGCTGA CCGTGTTCAC CGGCGTCTCG
GGCTCGGGCA AGTCCTCGCT GGTCTTCGGC ACCGTCGCGG CCGAGTCCCA GCGCCTGATC
AACGAGACCT ACAGCGCCTT CGTCCAGGGC TTCATGCCCA CCGTCGGCCG CCCCGAGGTC
GACTCCCTGC GCAACCTCAG CGCCGCCATC GTCGTGGACC AGGAGCGCAT GGGCGCCAAC
GCCCGCTCCA CGGTCGGCAC CGCCACCGAC GCGCACACCA TGCTGCGCAT CCTGTTCAGC
CGGTTGGGCG TCCCCCGCAT CGGCACCTCG GCCGCGTTCA GCTTCAACCT GCCCGACGGC
ATGTGCCCGC GCTGCGAGGG CCTGGGCAAG GTCTCCGCCG TCGACGTCGA CCAGCTCGTC
GACCGCTCGA AGTCGCTGCT CGGCGGGGCC GTCACCGTCC CCGGCTTCAC CGTCGACAAC
TGGTACGTGC AGACCTACGT CGCCTCCGGC TTCTTCGACC CCGACAAGCC GCTGGCCGAC
TACACCGACG CCGAGCTCGC CAAGCTCCTG CACGGCGAGC CCGTCAAGGT CAAGCTCGGC
TCCACCAACG TCACCTACGA GGGCCTGGTC GACAAGGTCC AGCGCCTCTA CCTGTCCAAG
GAGCGCGAGT CGCTCCAACC GCACCTGCGC GCCTTCGTCG ACCGCGCCGC CACCTTCACC
GCCTGCCCCG CCTGCGGGGG CGCCCGCCTC AACGAGGCCG CCCTGTCCTC CCGGATCGAC
GGCCTGAGCA TCGCCGACTG CTCCGCCCTG CAGATCAGCG ACCTCGCCGA CTGGGCCGCC
AAGCTCGACG CCCCCTCCGT CGCCCCCATG ACCGCCTCCC TGCGGCACAC CCTCGACTCC
CTGGTCCACA TCGGCCTCGG CTACCTGAGC CTGGACCGCC AGTCCGGCAC CCTCTCCGGC
GGCGAGGCCC AGCGGGTCAA GATGGTCCGC CACCTCGGGT CCGCCCTCAG CGACATCACC
TACGTCTTCG ACGAGCCCAC CGTCGGACTG CACCCGCACG ACATCCAGCG GATGAACAGC
CTGCTCCTGC ACCTGCGCGA CAAGGGCAAC ACCGTCCTCG TCGTCGAGCA CAAGCCCGAG
ACCATCCGGA TCGCCGACCA CGTGATCGAC CTCGGCCCCG GAGCGGGCAC CCTCGGCGGC
CGGGTCTGCT ACACCGGCGA CGTCGCGGGC CTGCGCGCCT CCGACACCCC CACCGGCCGC
CACCTCGGCC ACCGGGCGGG CCTGCGCGAG CACCCCCGCA CCCCCACCGG TCAGCTGCCC
ATCACCGGGG CCACCCTGCA CAACCTCAAG GACGTGAGCG TCGACGTCCC GCTCGGCGTG
CTCACCGTGG TCACCGGCGT GGCGGGCTCC GGCAAGTCCT CCCTCGTCCA CGGCTCCCTC
GACGGCCGCC CCGGCGTGGT CACCGTCGAC CAGTCCGCGA TCCGGGGCTC GCGCCGCAGC
AACCCCGCCA CCTACTCCGG CCTGCTCGAC CCGGTCCGCA CCGCCTTCGC CAAGGCCAAC
AAGGTCAAAC CGGGCCTGTT CAGCGCCAAC TCCGAGGGCG CCTGCCCGCG CTGCAAGGGC
ATCGGGCTGG TGTACACCGA CCTGGCCATG ATGGCCGGCG TCGCGACGCT GTGCGAGGAG
TGCGAGGGCA AGCGCTTCAC CCCGAAGGTG CTGGAGTACC GGCTGCGCGG CAGGAACATC
AGCGAGGTGC TCGCGATGCC GGTGACCGAG GCCCTGGAGT TCTTCACCGA GAAGCCCGCG
CGGGCGATCC TGGAGCGCAT GTCCGACGTC GGCCTGGGCT ACCTCACGCT CGGCCAGCCC
CTCACCACCC TGTCCGGCGG CGAGCGCCAA CGCCTCAAGC TGGCCATCCG CATGGGCGAG
GCCGGGGCCA CCTACGTGCT GGACGAACCC ACCACCGGAC TGCACCTGGC CGACGTCGAC
CAGCTGCTCG GCCTGCTCGA CCGGCTGGTC GACGCGGGCA ACACGGTGAT CGTGATCGAG
CACCACCAGG CCGTGATGGC GCACGCGGAC TGGATCATCG ACCTGGGACC GGGCGCGGGC
CACGACGGCG GGCAGGTCGT GTTCACCGGC ACCCCGGCCG ACCTCGTCGC GCGGGCGCAC
ACGCTGACCG GCAGACACCT GAAGGAGTAC GTGGGCCTGG GGTGA
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| Protein sequence | MANAADSHDA IEVRGARENN LADVSVDIPK RRLTVFTGVS GSGKSSLVFG TVAAESQRLI
NETYSAFVQG FMPTVGRPEV DSLRNLSAAI VVDQERMGAN ARSTVGTATD AHTMLRILFS
RLGVPRIGTS AAFSFNLPDG MCPRCEGLGK VSAVDVDQLV DRSKSLLGGA VTVPGFTVDN
WYVQTYVASG FFDPDKPLAD YTDAELAKLL HGEPVKVKLG STNVTYEGLV DKVQRLYLSK
ERESLQPHLR AFVDRAATFT ACPACGGARL NEAALSSRID GLSIADCSAL QISDLADWAA
KLDAPSVAPM TASLRHTLDS LVHIGLGYLS LDRQSGTLSG GEAQRVKMVR HLGSALSDIT
YVFDEPTVGL HPHDIQRMNS LLLHLRDKGN TVLVVEHKPE TIRIADHVID LGPGAGTLGG
RVCYTGDVAG LRASDTPTGR HLGHRAGLRE HPRTPTGQLP ITGATLHNLK DVSVDVPLGV
LTVVTGVAGS GKSSLVHGSL DGRPGVVTVD QSAIRGSRRS NPATYSGLLD PVRTAFAKAN
KVKPGLFSAN SEGACPRCKG IGLVYTDLAM MAGVATLCEE CEGKRFTPKV LEYRLRGRNI
SEVLAMPVTE ALEFFTEKPA RAILERMSDV GLGYLTLGQP LTTLSGGERQ RLKLAIRMGE
AGATYVLDEP TTGLHLADVD QLLGLLDRLV DAGNTVIVIE HHQAVMAHAD WIIDLGPGAG
HDGGQVVFTG TPADLVARAH TLTGRHLKEY VGLG
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