| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3488 |
|---|
| Symbol | |
|---|
| ID | 8327678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 4053409 |
|---|
| End bp | 4054476 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 644943988 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003101228 |
|---|
| Protein GI | 256377568 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTGACCA CCCGCGAGCT GAACCGCGCC ACCCTCGCCC GCCAGCTGCT GCTGGGGCGC
GCCGACCTGG ACGCGTGGGG CGCGGTGTCG CACCTGTGCG GGATGCAGGC GCAGGAGCCG
CAGGAGCCGT TCACCGGCCT GTGGTCGCGG TTGCGCGACT TCGCGCCCGC CGGGTTGGAC
GGGCTGGTCA CCGGCAGGCG CGCGGTGCGG GTGCACCTGA TGCGGCGGAC CGTGCACCTG
GTGACCTCGG ACGACGTGCT GGCGTGGCGG TCGCGGCACG CCGACATGCT GCGGCAGAAG
GTGCTCGGGG TGTACCGGGC GGACCTGGCG GGCGTGGACC TGGTCGAGCT GGCCGCCGCC
GGGCGCGAGG TGCTCGCGGA GGGGCCGGCG AGCGCGGCGG AGGTGGTGCG GGCGCTGGGC
GGGCGGTGGC CGTCGGTCGC GCCGCGCGCG CTGGGCGAGA TGGTGATCGC GGCGCTCGTC
CCGGTCGTCC AGACGCCGCC GCGCGGGCTG TGGCGGGCCA GGGGCGGGGT GCGCAACGCG
CTGCTGGCCG ATTGGCTCGG CCGCGAACCC GACCCGCCGG ACGACGGGGA CCCGGTCGGC
CGGGAGCTGG TGCGCCGCTA CCTGGCCGCG CACGGTCCGG CCAGCTCGGG GGACCTGCGG
ATGTGGAGCG GCCTGGCCGG GCTGCCCGCG GCCGTGGCGG CGGTGCGCGG GGAGCTGGTG
TCGTTCCGCG ACGAGCGCGG CCGGGAGCTG CTGGACCTGC CGGACGCGCC CCGACCGGAC
GGCGACGTGC CCGCGCCGGT GCGGTTCCTG CCCGCGTTCG ACAACGCGAT CCTGGGCTAC
CAGGACCGGA GCCGGATCGT CGACGACGCG CACAAGGGGC TGTCGGTGGC CGGGGAGCGG
GTGGTGCTGG TGGACGGGCG GGTCACCGCG ACCTGGCGGG TGGCCGAGGA CGTGGTGCGG
GTGGCGCCGC TGCGCGAGCT GACCGCTGGG GAGCGCGACG AGGTCGTGGC GGAGGGCGAG
CGGCTGGCGG GGTTCCTGAC CGGTGGGGAC CGGGTGGTGG TGGGCTGA
|
|---|
| Protein sequence | MLTTRELNRA TLARQLLLGR ADLDAWGAVS HLCGMQAQEP QEPFTGLWSR LRDFAPAGLD
GLVTGRRAVR VHLMRRTVHL VTSDDVLAWR SRHADMLRQK VLGVYRADLA GVDLVELAAA
GREVLAEGPA SAAEVVRALG GRWPSVAPRA LGEMVIAALV PVVQTPPRGL WRARGGVRNA
LLADWLGREP DPPDDGDPVG RELVRRYLAA HGPASSGDLR MWSGLAGLPA AVAAVRGELV
SFRDERGREL LDLPDAPRPD GDVPAPVRFL PAFDNAILGY QDRSRIVDDA HKGLSVAGER
VVLVDGRVTA TWRVAEDVVR VAPLRELTAG ERDEVVAEGE RLAGFLTGGD RVVVG
|
|---|
| |