| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3466 |
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| Symbol | |
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| ID | 8327656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 4029343 |
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| End bp | 4031133 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644943966 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003101206 |
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| Protein GI | 256377546 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0853012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGTGTTT GGCAGCGTAT CGTCGCCGCG TCGGCGGCGG CAGGTCTGTC CGTGTTGCCC
TTCGGGGTAC CGGCCCAGGC CCAGAACGAG GTCGTCTTAC GGGTGGCCAT CACCCAGCAG
GTCGACTCGC TCAACCCGTT CCTGGCCACC TTCCAGGCCA GCACCGAGGT CGGCAGGCTC
ATGTACGACT TCCTCACCGC CTACGACCAG CGCGACCAGA CCCCCGTCCC CGCCCTCGCC
GACCGGTGGT CCTCCAGCGA GGACCGGCTC ACCTGGACCT TCCACGTCCC CGAGGGCCGC
AAGTGGTCCG ACGGCCAGGA CATCACCGCC GACGACGTCG CCTTCACCTA CGACCTGATG
ATGCGCGACA CCACCGCCGC CACCGCCAAC GGCAGCTTCA CCGCCGACTT CGAGTCCGTC
ACCGCCTCCG CCGACGGCCG CGAGGTCGTC ATCAGGACCA AGCAGCCGCA GGCCACCATG
CTCGCCCTGG ACGTGCCCAT CGTCCCCGAG CACGTCTGGT CCGAGGTCAC CGACGTCGGC
GACTACACCA ACGACCAGGG CCCGGTCGTG GGCAGCGGCC CGTTCGTGCT CACCGAGCAC
AAGCCCAACG AGTTCATCCG CTTCGCCGCC AACAAGACCT ACTGGCGCGG CGCGCCCAAG
TACGACAGCC TCGTCTTCGT CTACTACAAG ACCACCGACG CCGCCGCCCA GGCCCTGGCC
AAGGGCGAGG TCGACCTGGT CAACCGCCTC GGACCCGCCC AGTTCGACTC GCTGGAAGGC
GCCGAGGGCG TCACCCGCAA CAAGGCCAAC GGCCGCCGCT TCAACGAGCT GGTCCTCAAC
TCCGGGGCCG CCACCAACAC CGGCGAGCCC ATCGGCGACG GCCACCCCGC GCTGCGCGAC
CTCGTCGTGC GCCGCGCCAT CGCCCAGGCC ATCGACCGCG ACGCCATCAT CGCCCGCGTC
AACAACGGCT ACGCCCAGCG CGGCACCGGC CCCATCCCGC CGGTCTTCCC CGCCTACCAC
CTGCCGCAGC CCGACCCCGA CCCGCTGCCG CACGACCCCG CCGCCGCCAA CGCCGCCCTC
GACGCCGCGG GCTACGCGCG CGGGGCCGAC GGCACCCGCG CCAAGGACGG CCGCCCGCTG
CGGCTGCGCC TGCTCGGCCA CGCCAGCCGC GCCTACGACG AGCAGGCCGC CGAGTTCGTC
AAGGGCGGCC TCGCGGCCAT CGGCGTCGCC GTCGACGTGC AGATCGTCTC CGACAACCAG
CTCAACGAGT CCGCCACCGC GGGCACCTTC GACCTGGTCT TCTCCGGCTG GGGCACCAAC
CCCGACCCCG ACTTCATCCT GTCGCTGCAC ACCTGCGCCC AGCGCCCCGG AGCCGACGGC
AAGGGCGGCA CCACCGACAC GTTCTTCTGC GACCCCGAGT ACGACGCGCT GCACGCCCGC
CAGCGCGCCG AGTTCGACCA GGCCAAGCGC GCCGACCTGG TCAAGCAGAT GCAGCGCCGC
TTCTACGAGC AGGTCCCGGC CGTCGTCCTC GGGTACGACA ACGTGCTGGA GGCCTACCGC
AGCGACAAGT TCACCGGCTT CCCCGTCCAG CCCGACCCCG GCGGCGTGAT CATGGCCCAG
AACGGCGTGT GGGGCTACTA CGGCGCCACC CCCGCCGCCG CCGGCGCGCA GCGGGACACC
GGCAACGGCA CCCTCGTCGT CATCCTCATC GTCGGCGTCG CGGTGGTCGT CGTGGCGGGC
GGGGTGCTGC TGGCCCGCAG GCGCGGCGCG GGCGCCGAGG ACCGCGAGTG A
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| Protein sequence | MGVWQRIVAA SAAAGLSVLP FGVPAQAQNE VVLRVAITQQ VDSLNPFLAT FQASTEVGRL
MYDFLTAYDQ RDQTPVPALA DRWSSSEDRL TWTFHVPEGR KWSDGQDITA DDVAFTYDLM
MRDTTAATAN GSFTADFESV TASADGREVV IRTKQPQATM LALDVPIVPE HVWSEVTDVG
DYTNDQGPVV GSGPFVLTEH KPNEFIRFAA NKTYWRGAPK YDSLVFVYYK TTDAAAQALA
KGEVDLVNRL GPAQFDSLEG AEGVTRNKAN GRRFNELVLN SGAATNTGEP IGDGHPALRD
LVVRRAIAQA IDRDAIIARV NNGYAQRGTG PIPPVFPAYH LPQPDPDPLP HDPAAANAAL
DAAGYARGAD GTRAKDGRPL RLRLLGHASR AYDEQAAEFV KGGLAAIGVA VDVQIVSDNQ
LNESATAGTF DLVFSGWGTN PDPDFILSLH TCAQRPGADG KGGTTDTFFC DPEYDALHAR
QRAEFDQAKR ADLVKQMQRR FYEQVPAVVL GYDNVLEAYR SDKFTGFPVQ PDPGGVIMAQ
NGVWGYYGAT PAAAGAQRDT GNGTLVVILI VGVAVVVVAG GVLLARRRGA GAEDRE
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