Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3380 |
Symbol | |
ID | 8327570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 3952653 |
End bp | 3953552 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644943886 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_003101126 |
Protein GI | 256377466 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.213081 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCGCCG TGCAACCCCA CCAGCTGGCC TACTTCCTCG CGGTCGCGGA GACCGGCTCG TTCACCAGGG GCGCGCGCCG CGCGGGCGTG GTCCAGTCCG CCGTGTCCGC CGCCGTCACC CAGCTGGAGC GGGAGCTGGG GGCCGAGCTG TTCGAGCGCC ACTACCACCG GGTGAGCCTG ACCGCCGAGG GCGAGGCGCT GCTGCCGCGC GCCCGCGACG TGCTGACCGC GCTCGACGCC GCGCGCGAGG CCGTCGCGGG CGCCAGGGGC GAGCTGGTCG GGACGGTCCG GCTCGGCACG ATCAGCTTCA CCGGACCGCT CGACCTGGCC GGTCTCCTGC GGTCGTTCGC CGCGCGGCAC CCGAGGGTGG AGGTCCACCT GCGCCAGACC ACCTCGGGCA CCGCGACCTC GCTGGACGAC CTGCGCTCCG GCGCGCTCGA CCTCGCCCTG GTGTCCACCC CGGCGGACGG GCTGCCCGGC GTCGCGCTGA CCGAGATCCA CCGCGAACCG CTGGTCCTGG TCTGCGGGCG CGACCACCCG CTCGCCTCGG CGGAGCGGGT GGGGATCGGG CAGCTCGCGG GGGAGCCGTT CATCGACTTC CCCACCGGCT GGGGCAACCG GGCCGTCATC GACCACGCCT TCGCCTCGGC GGGCGTCACG CGCGCCATCC GCACCGAGGT GACCGACTTC GCCCTCGCCC GCACCCTGGT GGAGCACGGG CTCGGGCTGT CGATCTTCCC GGCGGGCGCG GTGGACGGCC CTGCCGACGG CCCGGTCGCC CGCGTGCCGA TCCGCGAGTC CCCGGAGTGG ACGATCAAGC TCGCCCGCCC CGCCCCGCGC CGCGAGGGCA CGGCCGCCAC CGCCCTCGCC CGAGCGGTCC TGGACGCCGC GCGCGCCTAG
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Protein sequence | MAAVQPHQLA YFLAVAETGS FTRGARRAGV VQSAVSAAVT QLERELGAEL FERHYHRVSL TAEGEALLPR ARDVLTALDA AREAVAGARG ELVGTVRLGT ISFTGPLDLA GLLRSFAARH PRVEVHLRQT TSGTATSLDD LRSGALDLAL VSTPADGLPG VALTEIHREP LVLVCGRDHP LASAERVGIG QLAGEPFIDF PTGWGNRAVI DHAFASAGVT RAIRTEVTDF ALARTLVEHG LGLSIFPAGA VDGPADGPVA RVPIRESPEW TIKLARPAPR REGTAATALA RAVLDAARA
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