Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3326 |
Symbol | |
ID | 8327516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 3903655 |
End bp | 3904578 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644943837 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003101077 |
Protein GI | 256377417 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.100814 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTCCGGT ACCGCACCGG CCCGGACGAA CCCGACCTCC CGGACGCCAC CGCGACCCTG TCCTTCCACT TCCCACCCGC CGCGACCGGA TTACCGCCCC ACGTCGTCCG CGAGCCCCCG CTGGCCCGGT TCACCACCGA CCCCGACCCC GCCTGCCGCG ACTGCGCCCG CATCGACGCC CTCGTGCACC CCTGGGCCGT CAACGCGCTG ACCGGCCGCA CCGACCCCAC CGCCGTCCTC AGCGCCCGCC GGACCCACCT GCGGGACACC ATCCTGGCCG AACCGCTGCT CACCGCGTCC ACCGCGCCCG ACCGCCCCAC CCGCCTGCGC GCCCTGGACG AGGCCCTCCA ACGCCTCTGG GAGCGCGCGA CCCCGGTCCC CACCCCGGTC AGGCACACCT GGCACGCCCT CAGCCAGGTC CACGGCGCCG CGCTCATCTC CCACGTCGCC GCCGCGTCCG GCTGGAGCCA CCGCCAGCTC TCCCGCCGCT TCACCGCCGA GCTCGGCGTC CCCCTCAAGA CCGCCGCCAG GGTCCTGCGC CTGCACCGGG CGCTGCGCCT GCTCGCCGAC GGCCTGCCGG GCTCGCGCGT CGCGGCCGAG TGCGACTTCT ACGACCAGGC CCACTTCACC CGCGAGTGCC GCCTGCTCAC CGGCGCGACC CCGGAAGCGC TGCGGCGCAG GTCCGGGGGA ATGGCGATTT CGTCCAATAC CGCGCCCCCG GCGATCGGTG AGGATCGCTG CGCCGGCCGG TTCTCCCGGC CGCCGCGCAG TTCATCCACG AAGTGCCCGG AGGACAGCAT GGAGAACGCG ATCGAGGTGT ACGAGGCCCC CTGCCTGGTC GAGATCGGCG ACTTCGCCGA ACTGACCCAG CTCACCAACC GGGGCTACTG GCTGGACGGT CCCTGGGGCG CCTGGTGGTT CTGA
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Protein sequence | MVRYRTGPDE PDLPDATATL SFHFPPAATG LPPHVVREPP LARFTTDPDP ACRDCARIDA LVHPWAVNAL TGRTDPTAVL SARRTHLRDT ILAEPLLTAS TAPDRPTRLR ALDEALQRLW ERATPVPTPV RHTWHALSQV HGAALISHVA AASGWSHRQL SRRFTAELGV PLKTAARVLR LHRALRLLAD GLPGSRVAAE CDFYDQAHFT RECRLLTGAT PEALRRRSGG MAISSNTAPP AIGEDRCAGR FSRPPRSSST KCPEDSMENA IEVYEAPCLV EIGDFAELTQ LTNRGYWLDG PWGAWWF
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