Gene Amir_3320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3320 
Symbol 
ID8327510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp3895604 
End bp3896818 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content77% 
IMG OID644943831 
Producthypothetical protein 
Protein accessionYP_003101071 
Protein GI256377411 
COG category[S] Function unknown 
COG ID[COG3864] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGGCGC TGGACGAGGA GAAGCTGTAC GCGGCCCGGC TGCACGCGGC CCGCAGCCGC 
CCCTACCTGG CGACGGCGCT GTTCGCGCTG CGGGTGGTCG AGTCGCGGCA GGTGCCGACG
ATGGCGGTGG ACGAGCACTG GCGGTGCTAC GCCTCGCCCG CGTTCGTGGA GCGCACGCCG
CTGCCGGAGC TGGCGGCGGT GTGGGTGCAC GAGGTGTCGC ACCTGCTGCG CGACCACCAC
GGGCGGGGCG AGCGGTTCGC GCGGGAGAAC GGGCTGCACG GGGCGGGCGA GCGGTTGCGG
CGCAACATCG CGGCGGACTG CGAGATCAAC GACGACGGGT TCGACGACGA GCTGCCGCTG
CAGGCGGGCG CGCTCCGGCC GGGGCTGCTG CGGCTGCCGG ACGGGCTGCT GATGGAGGAG
TACCTGCGGC TGTTCCGGCT CGGGCCGCAC ACCGACGCGT TCGGGTGGTT GGACTGCGGC
AGCGGCGTCG ACGGGGTGGC GCGGGGGTGG GACCTGGGCG CGGGCGGGGC GCACGGGCTC
AGCGCGCGGG AGCGCGACGC GGTGCGGTTC CGGGTGGCGG AGGGCATCAA GGGCAGGCCG
GGGAGCGCGC CGGACGGGTG GGAGCGGTGG GCGGAGAAGG CGTTCCACCC GCCGCAGCCG
TGGCGGGAGC TGCTGGGCGC GGCGGTGCGC TCGGCGGTGT CCGGCGCCGG GGTCGGGGAG
GACTACACGT ACGGGCGGCC CGCGCGGCGC TCGGCCGGGC TGCCGGGCGT GGTCCTGCCG
AGCCTTCGCC GCAGGCCGCC GCGGGTGTGC GTGATCGTGG ACACCTCGAG GTCGGTGAGC
GACGCGGAGC TGGGGAGCGC GCTGCTGGAG GTCGCGGCGA TCGTGCGGGC GGTGGGCGGG
CGGCGCGACC TGGTGACGGT CCTGTCCTGC GACGCCGCCG CGCACGTGAC GGGGCCGCTG
TGCCGGGCGG AGGGGATGAC GCTGGTGGGC GGGGGCGGGA CGGATCTGCG GGTGGGGTTC
GCGCGGGCGG TGCGGCGGTG CCGGCCGGAC GTGATCGTGG CGCTGACGGA CGGGCAGACC
CCGTGGCCGG AGGCCGCGCC GCCGTGCCGG ACGGTGGTGG GGTTGTTCCC GCGAGTCGGG
GTGGCGGACG AGGGGGACCC GGATTACGAG CCGGACGAGC CGCCGGAGTG GGCTCGGGTG
GTGGAGCTGG GGTGA
 
Protein sequence
MTALDEEKLY AARLHAARSR PYLATALFAL RVVESRQVPT MAVDEHWRCY ASPAFVERTP 
LPELAAVWVH EVSHLLRDHH GRGERFAREN GLHGAGERLR RNIAADCEIN DDGFDDELPL
QAGALRPGLL RLPDGLLMEE YLRLFRLGPH TDAFGWLDCG SGVDGVARGW DLGAGGAHGL
SARERDAVRF RVAEGIKGRP GSAPDGWERW AEKAFHPPQP WRELLGAAVR SAVSGAGVGE
DYTYGRPARR SAGLPGVVLP SLRRRPPRVC VIVDTSRSVS DAELGSALLE VAAIVRAVGG
RRDLVTVLSC DAAAHVTGPL CRAEGMTLVG GGGTDLRVGF ARAVRRCRPD VIVALTDGQT
PWPEAAPPCR TVVGLFPRVG VADEGDPDYE PDEPPEWARV VELG