| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3297 |
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| Symbol | |
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| ID | 8327487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 3867406 |
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| End bp | 3870132 |
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| Gene Length | 2727 bp |
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| Protein Length | 908 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644943809 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003101049 |
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| Protein GI | 256377389 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.19391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGCTTC TGCGCGCACC CGAGATCCAG TCGGCCGTCG AGCACCTCGC GGTGGACCTG
CCGGACCGGG CGGGACGGGC GTTCCTGGTG GACGGACCGC CCGCCTGCGG AAAGACGACG
GCCCTGCGGC GGCTCGTCGA CCGGATCGCC CACGAGGACC ACCTCGTGCT CACCGCCACC
TGCACCCCGC CGGAGACGGA GCTGCCGTTC GGGGTGCTCA AGCAGCTCCT CGCCTCCCCC
GGCATGGCCA GGGTCGACCC GCGCCTGGTC GCCGACCTCG GCGAGCTGCT CGCCCCGGCC
CCGCCGCCCG CCGACGACTC GGCGCTCCTG CAGCTGTACC ACTCGCTGTG CGCGGCGCTG
ATCGCGCTGT CCGAGGAGGT GCCGCTGGTC ATCGCGGTGG ACGACGTCCG CCACGGCGAC
ACCGCCTCGC TGCACGTGCT GCTGCAGCTG GTGCACCGGC TGGACACGGC GCGGGTGCGG
CTGCTGCTCA CCGACGACCT GCTGCTGCCG GTGAGCTTCC CGCCGCTGCG CTACGAGCTG
CTGCGCCTGC GCGGGCTCGG CCTGGTCCGG GTCGCGCCGC TGCCTGCGGC CAGAGTGCGG
GAGGAGGCGG TGCGGGCGGT CGGCGCGGAC GTCGCGAAGC GGGTCGACTT CGCCGCGCTG
ACCGGCGGCA ACCCGCTGCT GCTGCACGCG CTGGCGGTGG ACGTGCTGGA GGCGGGCGAG
CCGCGCGAGA TCGGCTACGG CAACTCGTTC CTGTCCTGCC TGCACCGCAA CGAACCCCTG
TTCCTGGACA CCGTGCGGGC GCTGGCCGTG CTGGGCGGCG GCTCGGCGTC GGACCTGGGC
AGGCTGTCCG GGCACGAGCC GGAGCAGGTC GCCCAGGTGC TGAACGCCCT GCGGGAGTCG
GGGCTGCTGG CCGAGGACGG GTTCCGGCAC GACGCGGCGC GCCGCGCGGT CGTCGCGGAC
ACCCCGGTCG CCGAGCACGA GGTGCTGCAC CGCCGCGCCG CGCGGCTGCT GCGCGACCAG
GGCGGCGCGG TCACCGACAT CGCCGACCAC CTGCTGCGGG CGGGCCGCAT CACCGACCCG
TGGGCGGCGG ACCTGCTGGT GGACGCGGCG GAGCTGGTGG TGCAGCGCGG CGAGCCGACG
GCGGCGGTGG CGCTGCTCCA GCGCGCGCTC GACTGCAGCC CGGACCGGGA GCGCAGGACG
GCCGTGCAGG CGCGGCTGGC CACGGCCGAG TGGCTGGTGA ACCCGTCGAC CTCGGCAAGG
CACCACACCG CGCTGCTGGC GGCGTTCCAC GCGGGCAGGT TGTCGGTGCG CGACAGCGCG
ACGCTGATGA AGCACCTGCG CTGGGCCGGG AACACCGCCG ACTCGGACGC GGTGCTCGCC
CGGCTGCGGA CCGACCCGCG CGCCGCCGAG GACGTGCCGG TGCTGGAGCA CTGGCTGACC
AGCACCTACC CCGGCGCGGC CCGGCCCAGG ACCGTGCTGG GGCGGGACGT GGACTCGGCG
CGCAGCAGGG CGGACCTGGT GCCGAGGGCG AACGCGGTGC TGCTGGACGT GCTGGTGGCC
GGGGACAGCG ACGACGTGGC CGACCGGGCG GAGGCGGTGC TGCGGGAGCT GCGGCTGGCG
CGGGAGTCCG GGTGCTACGG CGGTGCGGCC GTGCTGGCGC TGTCCGCGCT GCTCTACTCG
GACCGCGCGG ACGTGGCCGC CTCGTGGTGC GAGCAGCTGC TGTCGGCGCG GGCCGTGCCG
CTGCTGCCGA TGCCGCGCGC GCAGGTGCTG GCGCTGGCGG CCGAGTCGGC GCTGCGCCGG
GGCGACCACC CGAGCGCGGA CGAGCTGGCG CGGGAGGCGC TGACCGTGGT GTCCCCGACC
GCGTGGGGGG TGTCGGTGGG GCTGCCGCTG AGCACCAGGG TGCTGGCGCT GACCAGGATG
GGCCGCTACG ACGAGGCGGC GGCCGTGGTG GCGCAGCCGG TGCCGAACGG GATGTTCGGG
CACCGCAACA GCGTGGACTA CCTGTACGCG CGCGGGCACT TCTTCCTGGC GCGGGAACGG
CCACGCGCGG CGCTGGGCGA CTTCCTGCTG TGCGGGGAGC AGCTGACCCG GTGGGGCCTG
GGCAGCGGGT GCGCGCCGGT GCCGTGGCGG ACCGCGGCGG CGGAGGCGTG GCTGGCGCAG
GGCAACCGGG ACCAGGCGCG GGTGCTGATC CACGAGCAGC TCGGCAGGCC GGGCACGGAC
AGCCGCCGGG CGCGCGGGCA GGCGCTGCGG CTGCTCGCGG CGACCAGCTC GGTGAAGCGG
CACCCGCAGC TGCTGCGGGA GGCGGTGGCG GTGTTCGAGG CCGTCGACGA CAAGTACGAG
CTGGCGCGGA CCCTGCGCGA CCTGGGGAGG GCGCAGCGGG CGCTGGGCGA GAACAAGCTG
GCGCGCCGGG TGATCCGGCG GGGGTGGCAC GTCGCCCGGA TGTGCGAGGC GGCGCCGCTG
TGCGAGGAGC TGATGCCCAC CGCCGACGGG CTGGTGCCCG CGCAGCCCGC GTCGGCGGCC
CGCAGGTCGG ACCTGGACCG GTTGACCAGC TCGGAGCACC GGGTGGCCGC GCTCGCGGCG
TCGGGGCTGA CGAACCGGGA GATCGCGGTG AAGCTGTACG TCACGCACAG CACGGTGGAG
CAGCACCTGA CGCGGGTGTT CCGCAAGCTC GGGATCAAGC AGCGGGAGCA GCTGCCGCCG
GAGCTGAGCG TCGACCGGTC GAAGTGA
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| Protein sequence | MELLRAPEIQ SAVEHLAVDL PDRAGRAFLV DGPPACGKTT ALRRLVDRIA HEDHLVLTAT
CTPPETELPF GVLKQLLASP GMARVDPRLV ADLGELLAPA PPPADDSALL QLYHSLCAAL
IALSEEVPLV IAVDDVRHGD TASLHVLLQL VHRLDTARVR LLLTDDLLLP VSFPPLRYEL
LRLRGLGLVR VAPLPAARVR EEAVRAVGAD VAKRVDFAAL TGGNPLLLHA LAVDVLEAGE
PREIGYGNSF LSCLHRNEPL FLDTVRALAV LGGGSASDLG RLSGHEPEQV AQVLNALRES
GLLAEDGFRH DAARRAVVAD TPVAEHEVLH RRAARLLRDQ GGAVTDIADH LLRAGRITDP
WAADLLVDAA ELVVQRGEPT AAVALLQRAL DCSPDRERRT AVQARLATAE WLVNPSTSAR
HHTALLAAFH AGRLSVRDSA TLMKHLRWAG NTADSDAVLA RLRTDPRAAE DVPVLEHWLT
STYPGAARPR TVLGRDVDSA RSRADLVPRA NAVLLDVLVA GDSDDVADRA EAVLRELRLA
RESGCYGGAA VLALSALLYS DRADVAASWC EQLLSARAVP LLPMPRAQVL ALAAESALRR
GDHPSADELA REALTVVSPT AWGVSVGLPL STRVLALTRM GRYDEAAAVV AQPVPNGMFG
HRNSVDYLYA RGHFFLARER PRAALGDFLL CGEQLTRWGL GSGCAPVPWR TAAAEAWLAQ
GNRDQARVLI HEQLGRPGTD SRRARGQALR LLAATSSVKR HPQLLREAVA VFEAVDDKYE
LARTLRDLGR AQRALGENKL ARRVIRRGWH VARMCEAAPL CEELMPTADG LVPAQPASAA
RRSDLDRLTS SEHRVAALAA SGLTNREIAV KLYVTHSTVE QHLTRVFRKL GIKQREQLPP
ELSVDRSK
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