Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3240 |
Symbol | |
ID | 8327430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 3776444 |
End bp | 3778192 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644943753 |
Product | Recombinase |
Protein accession | YP_003100993 |
Protein GI | 256377333 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.143535 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCATCT TCTCCACTCC TTCGTCGGGT TCCGTGCGCG CGGGCCGCTC GCTCTCGATG CCCCTGTCCG GGGTTATCTA CCTGCGTGCC TCGCAGGACC GTTCGGGGGC TGCGGTGTCC GTTGATTCGC AGCTCAAGAT CGGGTTGCAG TTCTTCCGCG ACAACGACAT CAAGCACGTC GCCACGTATT CCGACAACAA CCTGAGCGGT TCGACGTTCG CCACCGAGGT GCGGGGCGGG TACGAACTGA CAGTGGACGC GATGCGGTCC GGGCTGGGCA ACCTGGTCTG GACGTGGGAC TCCGCCCGTG CCCAGCGTGA CATCGGAGTG TACGCCCGTC TGCGGGAGCT GTGCAGGGAG ACCGGCGGTT TCTGGGCCTA CGGCAACCGC ATTTACGACA TACGCGATCC GAAGGACAGG CGTGACAGCG CGAAGGACGC GGTGGAGGCC GAGGGGCGTT CGGATGAGAT TTCGCTCAAC ACGCGCCGAG GGGTGTGGTC GCGTGCGGAG CGCGGCGAGC ACGCCGGGAC CGTCGCCTAC GGGTACCGCC CTGTTTACAG CCCGGAGACC GGGAGGTCTT TGGGGTGGGC GGTCGTGGAG GAGGAAGCCG AGGTGATCCG CCGGATCGTG GCGTGGGTGC TGGAGCGGAA GCCGCTGTCC TGGATCGCCC GCGAGTTGAA CGGGGAGGGT GTTCCCTGCC CGCACGACCG GCGTTGGGAC AAGCGCTACG TGGCGCGTCT GGTGGAGCAC CACCGCTATC CTGAGGAATG GTTGCGGCTG ATGTCGGAGT TGTCGCCGGA GGAATGCGAG AACGCGGCGG CGATCGTCGC CGAGGTGCGC GGCGGGCAGA CCCCGAAGGA AGTCGCGCGG GCGCTGAACC GGGCCGGGGT GAAGCGGATC TTCCGGTGCG AGTGGGACGC GGGCAAGGTG CGCAGACTGG CGCTGTCCGC GCCATCGGCG GGGCTGCGGG TCTATCACGG TGAGGTCGCG ATGCGCGAGG TCGTCGACGA GTCCGGTGGG GTCCGGGCGG TGCCGCTGGA GACGCGGTGG GAGCCGATCA AGACCCTGGA GCAGCACGAG CAGGTGGTGG CGCTGCTGTC CGCGCCCGAG CACGGGAAGG TCCGGGACGG CAACCGCGTG AAGTACCGCT GGTCGGGGAT CGTGGTGTGC GGGGTGTGCG GCGGCAACAC CACGGTGGTC ACGAACGCGG GCAAGTTGCG TATGCGCTGC TATCGGCGTT CGTGTGTGGT GCGGGAGTAC GCGCCGTTGG ACCTGTGGCT GACCGAGTCG GCGTTGTCGC TGCTGGAGCG GGAGAACGCG GCGAGCCTGT TCCGGCTGGA CGAGGCCGAC ACAGGCCAGG CCCGCGCGGC GCAGCGGAAG GCGCAGCAGT TGCGCGCCAG GTTGGACGGG CTGCGCGCGC AGGCGATGGC GGGCGGGATC ACTCCCGAGT CGTTCGCCAT GTTCGAGTCG GGGTTGTTGC CGGAGATCGC CCGGCAGGAC GAGTTGGCCC GGCGGGTGAC GGTGCCGCCG TCGCTGGTGA GCCTGCTGGC CGAGCGGCAG ACCGACCTAC GTCAGGTGTT CCTGGGAATG TCGGTGGTGG AGCAGCGGGA GATCCTGCGC ACGATCATGC GGCCGAGGCT GCTGCGCGCG TCCCGCAAGC GGGGACCATT CGACCCCGGC GCTGTCGATC TCGGGGTGCG GTCCGCTCCG GCAGCGACCC CGGTGCAGGA GGCCACGACG GCGGCCTGA
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Protein sequence | MAIFSTPSSG SVRAGRSLSM PLSGVIYLRA SQDRSGAAVS VDSQLKIGLQ FFRDNDIKHV ATYSDNNLSG STFATEVRGG YELTVDAMRS GLGNLVWTWD SARAQRDIGV YARLRELCRE TGGFWAYGNR IYDIRDPKDR RDSAKDAVEA EGRSDEISLN TRRGVWSRAE RGEHAGTVAY GYRPVYSPET GRSLGWAVVE EEAEVIRRIV AWVLERKPLS WIARELNGEG VPCPHDRRWD KRYVARLVEH HRYPEEWLRL MSELSPEECE NAAAIVAEVR GGQTPKEVAR ALNRAGVKRI FRCEWDAGKV RRLALSAPSA GLRVYHGEVA MREVVDESGG VRAVPLETRW EPIKTLEQHE QVVALLSAPE HGKVRDGNRV KYRWSGIVVC GVCGGNTTVV TNAGKLRMRC YRRSCVVREY APLDLWLTES ALSLLERENA ASLFRLDEAD TGQARAAQRK AQQLRARLDG LRAQAMAGGI TPESFAMFES GLLPEIARQD ELARRVTVPP SLVSLLAERQ TDLRQVFLGM SVVEQREILR TIMRPRLLRA SRKRGPFDPG AVDLGVRSAP AATPVQEATT AA
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