Gene Amir_3208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3208 
Symbol 
ID8327398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp3738078 
End bp3738692 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content76% 
IMG OID644943723 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003100963 
Protein GI256377303 
COG category[S] Function unknown 
COG ID[COG3226] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.443054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCGAC GCAACCCGGA GCGGCGGGCG GCGCTGCTCG ACGCCGCCGT CGAGGTGCTG 
GCGGGCGACG GCGCGCGGGG GCTCACGTTC CGGGCGGTCG ACCAGCGGGC AGGCGTGCCC 
GCCGGCACCG CGTCGAACTA CTTCGCCGGG CGCGCCGAGA TCCTCACCGG GGCGGGCGAG 
CGGGTCTACC AGCGACTGCT CGACCAGGCC CTGCTGACCG AGACCCTGGA CGGCCCGCGC 
GACCGGGCCC GCGTCACCGA GCTGACGCAC GCCCTCGTCG ACCGCGTCTC GGCCTTCCCG 
ACCGGTTTCC TCGCCCTGCT GGAACTGCGC CTGGAAGCCG CCCGCAGCCC GGAGCTCCGC 
GAGGTCCTGA CCGCCCGCGT CCGCGCCGAC CTGCGCTTCA ACGCCGAGCA CCACGCGGCC 
TCCGGCCTGC CCGGCGACGG CACCACCGTG GCGCTGCTGT GGCTGGCCCT CAACTGGCTG 
GTCCTGGAAC GCCTCACCCT CCCGGACCTG CTGACCGACG ACCAGCGGCG CGACCTCGTC 
ACGGCGCTGG TCGACCGGCT GCTCGCGGGG CAGCCGGAGC GGGCCGTCGA CCCGTTCGGG 
GAGAGCGGAA GATGA
 
Protein sequence
MARRNPERRA ALLDAAVEVL AGDGARGLTF RAVDQRAGVP AGTASNYFAG RAEILTGAGE 
RVYQRLLDQA LLTETLDGPR DRARVTELTH ALVDRVSAFP TGFLALLELR LEAARSPELR 
EVLTARVRAD LRFNAEHHAA SGLPGDGTTV ALLWLALNWL VLERLTLPDL LTDDQRRDLV 
TALVDRLLAG QPERAVDPFG ESGR