Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3190 |
Symbol | |
ID | 8327380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 3695911 |
End bp | 3698670 |
Gene Length | 2760 bp |
Protein Length | 919 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 644943707 |
Product | transcriptional regulator, putative ATPase, winged helix family |
Protein accession | YP_003100947 |
Protein GI | 256377287 |
COG category | [R] General function prediction only |
COG ID | [COG3899] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.134383 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCTTTC AGCTCTTGGG TCCGCTCGAA GTCGTCGACC GGTCCCGGCC GGTGGCACTC GGCGGCACCA AGCAGCGCGC CGCCCTCGGC TACCTGCTGC TGCACCCGAA CAGCGTGGTG CCGACCAGCA GCCTGCTCAA GGCGCTGTGG CCGAAGGACA TGCCGCCCAC CGGGCGCAAG ATGCTCCAGA ACGCGGTCGC CGCCCTGCGC GGCGTGCTGA CCGCCGCCGG TGACTCGCCC GGCGCGCCCG CCCTGCTCAC CCACACCCCC GGCTACCTGC TGCGCGTCGA TCCGGAGGAC GTGGACCTGA GCCGCTTCCG CAGGCTCGTC CACGCCGGGC GCGCCGATCT CACGGCGGGC TCCTGGCAGC GCGCCGCCCG CACCCTGCGC GACGCGATCG GCCTGTGGCG CGGGCCGCTG CTGGCCGACC TGGTGGAGCA GGGCGTCGAC TGGCCCGAGC TGGCGGCCGT GCGCAACACC CGGCTGGCCG CGCTGGAGGA CTGCGTCGAG GCGGAGTTCG CGTCCGGCCG CTACGGCGAG ATGATCTACG AGCTGGAGCG GTGGGTCGAG GCCGAGCCGC TGCGCGAGCG GCTGTGCGGC CAGCTCATGC GGGCGCTCTA CCACTGCGGC AGGCAGGCCG ACGCGCTCGG CGTCTACCGG CGCACCAGGG CCAGGCTGGT GGACGAGCTG GGGCTCGACC CCGGCCGCGA GCTGCGCGAG CTGGAGCGGG CGATCCTCAA CCAGGAGGTG CCGCACCGGC TCCCGGCCCG GCGCGAGACG GCGCCCGCCG CGCGGTCCGG GGCGGCCGAG GGCGGTGGCC CGGTCGCCGC ACCCCCGGTC GCCGCGCTCC CGGTCGGGAT CGTCCCGCAG CGGCAGGCGC CCCCGGCGCC CGCCCCCGTC ACGCCCGCCC CCGTCGCCCT CGCGCCCCTT CCCCCGGCGT CCGCGCCGAC CGCCGAGCTC AAGCACGTCA GCGTCCTCAT GGTCCTCACC CGGTTCGAGC ACGACGTGGC CGCAGCCCCG CCCGAGGAGG TGGACGACGC GCTGAGCGAC GTCGCCGCCG CGGTGCGCGA GGAGGTCGAG CGCGCGGGCG GCGTGGTCAC CGCCAAGGCC GCGTCGCTGA TCGTCGCCCT GTTCGGCTCC ACCCGCAGCG GCGAGGACGA CGCCACCAGG GCGGTGCGCG CCGCGCTCGC CGTGCGCGAC CGGCTCGCCC ACGGTCCGCG CGGCGCCGGA CCCGCCGCGC TCGGCGTCAC CGCCGCCGTC GCCACCGGGC ACGCCCTGGT GCGGCGCCAC CCTGGGCGCG CGCCCGAGGT CGGCGGCGGC GTGCTCGACC GCTGCATGAG GCTGCTCGCG CACGTCTCGC CCGGCGAGGT CAGGGTGTGC GAGGAGACCA GGGGCGCCAG CGAGGGCGCC ATCGGCTACG ACGGCCCCCA CGACCCGGTG CGCGGGTCCT GGGCCACCGG GGCCAGGCAA GGCGCGGGCG GGACCCCGGC CGCGCCGCCG CTGGTGGACC GGGACCGCGA GCTGGCCCTG CTGCGCGGCC TGCTGGAGCA GGTCGGCCGC CGGTCCCGGA CGCACCTGGT GACCGTGCTC GGCGAGCCCG GCATCGGCAA GAGCAGGCTC GTGGACGAGT TCCAGCGCGT GGCCGAGACC TCGTCGACCG TCGTGGTCCG CTGCCCCCGC CTCGGCGGAG GGGGCGACCT CGCCCCGCTC GCCGACGCCC TCGCCCCGCG CATGGGCATC GGCCCCGCCG ACCCGGTCGG GCTGGTCGCC GCCAAGCTCG CCGCCGCCGC GCGCGGCAGC GGTGGCGCGG GCGAGCGCGC GGACCGGCTG CTGGCCAGGC TGCGCGTCCT GTTCGGGCTC GACGTGCCCG ACGTGCTCCC GGACGGCTCG TTCGCGGCGT GGCGGCACGT GCTGGAGGAC CTCGGCGGCG CCGACCCGCT CGTCCTGGTC CTGGAGGACC TGCACTGGGC AGGCGAGGCG CTGCTGGACT TCGTGGACCA CCTCACCGCC GAGGCCACGT CGTCCCCGCT GCTGGTCGTG GTCACCGCGC GCCCCGAGCT GTTCGACCGG CGCCCCGCCT GGGGCGGCGG CAAGGCCGAG GCCAGCACGA TCACGCTCGA CCCGCTCGCC GACCAGGACG TGGAGCGGCT GCTCACCGCC CTGTGCGTCC GGCGCGGCCC CGCGTCCGCC CCGACCGACG AGGCGCGCGC CGCCTACCGC GAGGTGATCG CCCACATCGG CGGGAACCCG CTGTTCGCCG TCGAGTACGC CAGGGTGCTC GCCGACGCGG GCCCGCCGTC CGGGGGCGGC GGGCAGTCGC CGCCGCTGCC GCCGCTGGTG CGCAGGGTCG TGGCGGCCCG GATCGACAGC CTGCCCGCCG ACGCCAAGGC GGTGCTGCTC GACGCGGCCG TCCTCGGCGA GGACCTGTGC GAGGAGGGGG TGCGCGCGCT CGGCGGCGGC GCCGTGCCCG ACGTGGCGCG CGCCCTGGAG CACCTGGAGC GGCGCGAGGT CCTGCGCCGG GACCGGGACG CCGAGCGCGC CACCGCCTAC GCGTTCCGCA GCCCGCTCGT GCGCGACGTC GCCTACCTGA CCATCCCCCA GCACGCCCGC GCCGAGAAGC ACCGGCGAGC GGCCGACTGG TTGGAGCGCG TGCCCGGTCA CGACGCGCTG CGGCTGGTCC ACCACGGGCT CAGGTCGGGC GGGTGCCGCC CGGTCGAGCC CTCGCCGGTG CTCCCGCAAC CCCGGCAGCA CGCGCGCTGA
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Protein sequence | MRFQLLGPLE VVDRSRPVAL GGTKQRAALG YLLLHPNSVV PTSSLLKALW PKDMPPTGRK MLQNAVAALR GVLTAAGDSP GAPALLTHTP GYLLRVDPED VDLSRFRRLV HAGRADLTAG SWQRAARTLR DAIGLWRGPL LADLVEQGVD WPELAAVRNT RLAALEDCVE AEFASGRYGE MIYELERWVE AEPLRERLCG QLMRALYHCG RQADALGVYR RTRARLVDEL GLDPGRELRE LERAILNQEV PHRLPARRET APAARSGAAE GGGPVAAPPV AALPVGIVPQ RQAPPAPAPV TPAPVALAPL PPASAPTAEL KHVSVLMVLT RFEHDVAAAP PEEVDDALSD VAAAVREEVE RAGGVVTAKA ASLIVALFGS TRSGEDDATR AVRAALAVRD RLAHGPRGAG PAALGVTAAV ATGHALVRRH PGRAPEVGGG VLDRCMRLLA HVSPGEVRVC EETRGASEGA IGYDGPHDPV RGSWATGARQ GAGGTPAAPP LVDRDRELAL LRGLLEQVGR RSRTHLVTVL GEPGIGKSRL VDEFQRVAET SSTVVVRCPR LGGGGDLAPL ADALAPRMGI GPADPVGLVA AKLAAAARGS GGAGERADRL LARLRVLFGL DVPDVLPDGS FAAWRHVLED LGGADPLVLV LEDLHWAGEA LLDFVDHLTA EATSSPLLVV VTARPELFDR RPAWGGGKAE ASTITLDPLA DQDVERLLTA LCVRRGPASA PTDEARAAYR EVIAHIGGNP LFAVEYARVL ADAGPPSGGG GQSPPLPPLV RRVVAARIDS LPADAKAVLL DAAVLGEDLC EEGVRALGGG AVPDVARALE HLERREVLRR DRDAERATAY AFRSPLVRDV AYLTIPQHAR AEKHRRAADW LERVPGHDAL RLVHHGLRSG GCRPVEPSPV LPQPRQHAR
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