Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3039 |
Symbol | |
ID | 8327229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 3513640 |
End bp | 3514395 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 644943564 |
Product | GntR domain protein |
Protein accession | YP_003100804 |
Protein GI | 256377144 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTGGTCGG ACCACACCAG GGCGCGGGCG GGGGTTGCGG TGAGCGGATT CGGGGTGGTG CTCGCGCACG TGGAGGCGGA GCTGGCGGCG GGCAGGCTCG TGGTGGGCGG GCAGCTGCCG CCCGAGCGCA GGCTCGCGGG CGAGCTGGGG GTGAGCCGCT CGACGGTGCG CGAGGCGATC CGGGCGCTCC AGGCGCTCGG CGTGGTGCGC AGCGGCGTCG GGTCCGGGCC GGACGCCGGC ACCACGGTGA TCGCCGACCC GGCGGGCGGG ATCGGCGCGG CGCTGCGGCT GCACCTGGCC ACCCGCAGGC TGCCGCTGGC GGACCTGGTC GGGACGCGGG TGCTGCTGGA GGGCGCGTCG GCGCGGGCTG CGGCGGCGCG CGGGGACGCG GCGGAGCTGG CGGCGGCGGG CGAGCTGCTG GACCGGATGG ACGCGCCGGG CATCGGCGCC GAGGAGTTCC ACCGGCTCGA CGCGGACTTC CACGTCGCGC TCACCCGCGC GGCGGGGAAC GCGGTGAACA CCGCCGTCAT GACCGCGCTG CGCGACGCGA TCCACCACAC CGTGCTGCGG GCGGTGGCGG AACTGCCGGA CTGGGCGGGC ACGGCGCGGC GGCTGCGCGC GGAGCACCGG GCGGTGCTGG CGGCGGTGCT GGCGGGGGAG GAGGACGCGG CGGCGGAGCT GGTGACCGCG CACGTGGAGG GGTTCCACCG GGAGTGGGAG CGGGCGGGCC GCGGTGACCG GGGTGTTGAT CACTGA
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Protein sequence | MWSDHTRARA GVAVSGFGVV LAHVEAELAA GRLVVGGQLP PERRLAGELG VSRSTVREAI RALQALGVVR SGVGSGPDAG TTVIADPAGG IGAALRLHLA TRRLPLADLV GTRVLLEGAS ARAAAARGDA AELAAAGELL DRMDAPGIGA EEFHRLDADF HVALTRAAGN AVNTAVMTAL RDAIHHTVLR AVAELPDWAG TARRLRAEHR AVLAAVLAGE EDAAAELVTA HVEGFHREWE RAGRGDRGVD H
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