Gene Amir_2859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2859 
Symbol 
ID8327048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp3293115 
End bp3293675 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content71% 
IMG OID644943393 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003100634 
Protein GI256376974 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.111234 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAGGC CGACCAAGCA CGAGCTCGAC GCGGAGATCA TCGACTCGGC GGCGAGGCTC 
TTCGCCCGGC ACGGCTTCGA GCACACCTCG CTCCAGCAGC TCGCCGACGC GGTCGGCTAC
ACGAAGGCCG GGCTCCTGCA CCACTACCCG AGCAAGCTGG CCCTCTACCG GGCGGTGCTG
GAGCGCGGGA ACACCGAGAC GCGCGCCCTG CTGGGGCGGA TCGACCACCT GCCGCCGGGG
GAGGAGCGCG ACCGCGCCGC CATCGTCGGC TCGGTCCAGT TCACGATCGA CTGGCCCGGC
CTGTCGATGC TGTCGATCAG CGCGGGCATG GACAGCGGCC CGGTGGACCA GGAGGAGTTC
ATCGAGATGG GCCGGGCCAT GCTGGCGATC TTCTGCGTGG ACCCGGAGGA CTACGACGTG
ACCCGGTTCA TCCGGCTCGG CGTGGCGACC GCGGGCCTGA TGTCGATCAC CCTGGCCTCG
GTGCAGCTCG GCACCCAGGA GCAGTGGCGC GACCGGATCG TCGCCACGGC CATGGCGGCG
CTGGGGCACG GCGAGGGCTG A
 
Protein sequence
MPRPTKHELD AEIIDSAARL FARHGFEHTS LQQLADAVGY TKAGLLHHYP SKLALYRAVL 
ERGNTETRAL LGRIDHLPPG EERDRAAIVG SVQFTIDWPG LSMLSISAGM DSGPVDQEEF
IEMGRAMLAI FCVDPEDYDV TRFIRLGVAT AGLMSITLAS VQLGTQEQWR DRIVATAMAA
LGHGEG