Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2859 |
Symbol | |
ID | 8327048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 3293115 |
End bp | 3293675 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644943393 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003100634 |
Protein GI | 256376974 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.111234 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAGGC CGACCAAGCA CGAGCTCGAC GCGGAGATCA TCGACTCGGC GGCGAGGCTC TTCGCCCGGC ACGGCTTCGA GCACACCTCG CTCCAGCAGC TCGCCGACGC GGTCGGCTAC ACGAAGGCCG GGCTCCTGCA CCACTACCCG AGCAAGCTGG CCCTCTACCG GGCGGTGCTG GAGCGCGGGA ACACCGAGAC GCGCGCCCTG CTGGGGCGGA TCGACCACCT GCCGCCGGGG GAGGAGCGCG ACCGCGCCGC CATCGTCGGC TCGGTCCAGT TCACGATCGA CTGGCCCGGC CTGTCGATGC TGTCGATCAG CGCGGGCATG GACAGCGGCC CGGTGGACCA GGAGGAGTTC ATCGAGATGG GCCGGGCCAT GCTGGCGATC TTCTGCGTGG ACCCGGAGGA CTACGACGTG ACCCGGTTCA TCCGGCTCGG CGTGGCGACC GCGGGCCTGA TGTCGATCAC CCTGGCCTCG GTGCAGCTCG GCACCCAGGA GCAGTGGCGC GACCGGATCG TCGCCACGGC CATGGCGGCG CTGGGGCACG GCGAGGGCTG A
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Protein sequence | MPRPTKHELD AEIIDSAARL FARHGFEHTS LQQLADAVGY TKAGLLHHYP SKLALYRAVL ERGNTETRAL LGRIDHLPPG EERDRAAIVG SVQFTIDWPG LSMLSISAGM DSGPVDQEEF IEMGRAMLAI FCVDPEDYDV TRFIRLGVAT AGLMSITLAS VQLGTQEQWR DRIVATAMAA LGHGEG
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