| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2817 |
|---|
| Symbol | |
|---|
| ID | 8327006 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 3245310 |
|---|
| End bp | 3246332 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644943352 |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_003100593 |
|---|
| Protein GI | 256376933 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGGCT ACTCGGCGCC CGTGCGCGCC AGCGTGGACG TCACCTACGC GTGCGACCTG
CGCTGCGTGC ACTGCCGCAC CAACACCGGC GAGATCCCCG CGCACATCCG CCGCCGGATG
CTCTCGGTCG AGCAGCTCGG CGAGGTGCTG CTGGAGCTCG ACCGCATGGG TGCCTTCGAG
ATCACCCTCA CCGGCGGGGA ACCCACGATC CGCAAGGGCT TCTGGTCGCT GCTGGACGTG
GTGCCGCGCC TGCGGTTCGC CACCGTCACG CTGATCACCA ACGCCGCCAA CCAGACCCGC
GAGCAGCTCG ACCGCATCGT GGACAGCGGC ATCTCCTCGA TCCGGGTCAG CATGGACGGC
ACCCGCGAGA CGTTCGAGGC GGTCCGGCTG GTCGACGCGT TCGACCGGGT GATCGAGAAC
TCGGCGTACC TGCGCGACCG GGTGCGCAGC TTCAAGGTGC TCACCACGGT CATGAGGACC
AACCTGCACA ACGTCCTGGA GCTGACCGCG CACCTGCGCC GCACCGGTTT CCGCCGCCAG
GACCTGATCC TGGTGCGCGC GCACGGCAGG GGAGGCCGCA ACCGCCTGCT GCTGACCGAG
GACGAGACCA TGCGGCTGCA CGCCGAGGTC GCCGCGTTCC AGGACCGGGT GCCCGCCACC
GAGTTCGACC TGAACCTCAA CGCGCCCTAC CTGGTGCCGG GCCGGGGGAT GCCGACGCAC
CAGGACGTGG TGATGTTCCC CTACCTGGTC AAGGACAGCA GCATCGCGAT CTCCGCGACC
GGCGACGTGA CGATGAGCAG GCTCTACAGC TCGCACCCGC TGGGCAACAC CAAGGACGCG
CCCGTCGCGG ACATCTGGGC GCGCGGGCAG GAGCAGTTGG CGCGCGAGCA GGAGGAGTTC
ACCGACGAGC GGTTGCGGGA GATCTTCTGG GACTTCGCGG CGGCGGAGCG GTCGACGAGC
GAGCCGCTCG TGCTGACCTC CCTGCTGGAC CGGCAGATCT TCGAGGGGTA CGAGGTGCGC
TGA
|
|---|
| Protein sequence | MPGYSAPVRA SVDVTYACDL RCVHCRTNTG EIPAHIRRRM LSVEQLGEVL LELDRMGAFE
ITLTGGEPTI RKGFWSLLDV VPRLRFATVT LITNAANQTR EQLDRIVDSG ISSIRVSMDG
TRETFEAVRL VDAFDRVIEN SAYLRDRVRS FKVLTTVMRT NLHNVLELTA HLRRTGFRRQ
DLILVRAHGR GGRNRLLLTE DETMRLHAEV AAFQDRVPAT EFDLNLNAPY LVPGRGMPTH
QDVVMFPYLV KDSSIAISAT GDVTMSRLYS SHPLGNTKDA PVADIWARGQ EQLAREQEEF
TDERLREIFW DFAAAERSTS EPLVLTSLLD RQIFEGYEVR
|
|---|
| |