Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2718 |
Symbol | |
ID | 8326907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 3119448 |
End bp | 3120851 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644943258 |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_003100499 |
Protein GI | 256376839 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.815638 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGCCC CCGGTTCGCG CATCGACCGG CCGCTGCTGC GCACCGCGTT CGTGCTGGTG CTGGGCACGT TCATGGCCAC CCTGGACGCG ACGATCGTCG CGGTCGGCGT CGACCGGCTC TCCGAGGACT TCGGGGCCGG GGTCACCGAG GTGCAGTGGG TGACCACCGC CTACCTGCTG GCGGTGGTCG CCTCGGTGCC CGCGTCCGGG TGGCTGGCCG ACCGGTTCGG CGGGCGGCGG GTGTGGCTGG GCGCGCTCGG GGTGTTCCTG CTCGGGTCGG CGCTGTGCGC GGTGGCCTGG TCGCTGCCGT CGCTGGTGGC GTTCCGGGTG GTGCAGGGCA TCGGCGGCGG GCTGCTGCCG CCCACCGGTC AGGCGCTGCT GGCGCGCGTG GCCGGACCCG GCCGGATCGG GCGGTTGATC AGCGTCGTCG GCGTGGTGCC GCTGCTGTCC CCCGTGCTGG GGCCGCTGAC GGGCGGGACG CTGCTGGCCG TCGCGGACTG GCCGTGGCTG TTCCTGGTGA ACCTGCCGAT CGGCGTGGTG GCGGCGGCGC TGGCGGTGCG GCACGTGCCG TCCGTTCCGC CGTCGGAGGC GCGCGCCCGG TTCGACCTGG TGGGCGCGCT GCTGCTCGCG CCCGGCCTGG CGGTGCTGGT GCTGGGCCTG ACCGGGGACG GCGGTCCGCC GGTGTCGGCG GCCGGCATCG GGCTCGGGGT GCTGGCGCTG GTGGCGTTCA CCTGGCACGG CCTGCGGGCG CGGGACGTGC CGCCGCTGGT GGACCCGAGG TTGTTCACCC GGCCGCCGTT CGGGGTCGCG GCGCTGGCGC TGCTGCTGCT GGGCGCGTCG GTGTTCGGCA CGATGTTCCT GCTGCCGCTC TACCTGCAGG GCGGCGGCGG GCTCACCCCG TGGCGGACCG GGCTCCTCCT GGCCCCGCAG GGGATCGGCG CCGCCGCCGG GTCGGTGCTG GTGAGCCGGC TGGTGGACCG GACCGCGCCC AGGGTGCTGG TGCTGTGCGG CATCGGCCTG GTCGCGCTCG GCACGGTCCC GTTCACGCAG CTGCACCACG CGCCGCCGGA CGCGCTGGTC GCGGGCGCGC TGCTGCTGCG CGGGGTCGGC GCGGCGCTGG TGAGCGCGCC GGTGCTGGCC ACGGTGTACC GGAGCCTGCC GCCCGGCGGG CTGCCCAGGG CCGCGGGCGC GCTGAACCTG CTCAACACCG TCGGCGGCTC GCTCGGCACC GCGCTGCTCG CGGTGCTGCT CGGCGGGCGG CTGGCGGCGC GCGGCCCCGA CGTGGCCGCC GCCTACGCCG ACACCTTCTG GTGGGTGCTC GCGCTGGTGC TCGTCGCGGC GGCCGGGGCG ACCCGGCTGC CCGCCTCCCC TCCCGTCTCC CCGAAGGACC CCAAGGATGA CTGA
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Protein sequence | MTAPGSRIDR PLLRTAFVLV LGTFMATLDA TIVAVGVDRL SEDFGAGVTE VQWVTTAYLL AVVASVPASG WLADRFGGRR VWLGALGVFL LGSALCAVAW SLPSLVAFRV VQGIGGGLLP PTGQALLARV AGPGRIGRLI SVVGVVPLLS PVLGPLTGGT LLAVADWPWL FLVNLPIGVV AAALAVRHVP SVPPSEARAR FDLVGALLLA PGLAVLVLGL TGDGGPPVSA AGIGLGVLAL VAFTWHGLRA RDVPPLVDPR LFTRPPFGVA ALALLLLGAS VFGTMFLLPL YLQGGGGLTP WRTGLLLAPQ GIGAAAGSVL VSRLVDRTAP RVLVLCGIGL VALGTVPFTQ LHHAPPDALV AGALLLRGVG AALVSAPVLA TVYRSLPPGG LPRAAGALNL LNTVGGSLGT ALLAVLLGGR LAARGPDVAA AYADTFWWVL ALVLVAAAGA TRLPASPPVS PKDPKDD
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