| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2701 |
|---|
| Symbol | |
|---|
| ID | 8326890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 3099293 |
|---|
| End bp | 3100354 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644943241 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003100482 |
|---|
| Protein GI | 256376822 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000302317 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCACGCA AAACTCTCAC CCTGACCACC ACCACCGCAG CAGCTGCCAC CCTGCTCCTG
CTCCTGCTCT CAGCCAGCAT CCTCCTCGCC ACCTCCACGA CCCGCGACCC GATGGACCCC
CGCGAAACCG CGGTGGTCTC CCTGGGCGAC AGCGCCATGG CAGGCGAGGG CGCGGGCGAC
TACACCCACG ACACCAACGG CGCGAACGGC AACTGGTGCC ACCGCTCCCC GCACGCCCTG
GTCCACCACA CCGCCCTGGC CACCCACTCG TTCAACCTGG CCTGCTCGGG CGCGGACTCG
ACCAACGTCT CCCTGGCCGA CACCACCCAC AACACCGAGG GCTCCCAGGC CCGCAGACTC
ACCGCCCTGG CCAAGCGGTA CCGCGTGACC ACGGTCCTGG TCCAGGTAGG CGCCAACGAC
GCCCCCCAGT TCGCCGAAAC CGTGGTCTCC TGCGTCCTGG CCTGGCTCAA CCCCTTCGGC
AAGGGCTGCC GCGAAGACCT CCGCAAATCC TGGCCATCCC GCCTCAACGC GATGACCCCC
AAAGTCGAAA CCGCCCTGCG CGACATCCGA ACCGCCATGA CCGAGGCCGG CTACACCGAG
GCCGACTACA CCCTGATCCT GCTCTCCTAC GCCTCCCCGG TGACCGAGAA GATCGACCGC
TTCCGCAGCG TCGCCCAGGG CTGCCCCCTG AAACCAGAAG ACGCCGCCTA CGGCAGGCTG
GAAGCCGTCC CCCAACTCTC AGACGCCCTA CGCGGCGCGG CAGAACGCAC CAACACCCGC
TTCCTGGACC TCTCAAGAGC AGCCGAGGGC CACGAGGCGT GCAGCCAGGG CGACGACCCG
ACCAACGAGT GGCAACGCAG ACTGACCATC ACCCCGGAAG CCCTCCGCGA CCTGGCCCAA
GCCCCGGAAG ACGCAGTCCT GCGCGCAGCC CAGCAGTCCT TCCACCCCAC CGCGCAGGGC
TACGCCCACA TGGCGACCTG CACCGCGGAA TTCGCCACCA CCACCCGCAA AACCGCCCTG
TGCGTCCCCG AGAACAACAC CCTCCGCCTC GCAGACGGCT GA
|
|---|
| Protein sequence | MPRKTLTLTT TTAAAATLLL LLLSASILLA TSTTRDPMDP RETAVVSLGD SAMAGEGAGD
YTHDTNGANG NWCHRSPHAL VHHTALATHS FNLACSGADS TNVSLADTTH NTEGSQARRL
TALAKRYRVT TVLVQVGAND APQFAETVVS CVLAWLNPFG KGCREDLRKS WPSRLNAMTP
KVETALRDIR TAMTEAGYTE ADYTLILLSY ASPVTEKIDR FRSVAQGCPL KPEDAAYGRL
EAVPQLSDAL RGAAERTNTR FLDLSRAAEG HEACSQGDDP TNEWQRRLTI TPEALRDLAQ
APEDAVLRAA QQSFHPTAQG YAHMATCTAE FATTTRKTAL CVPENNTLRL ADG
|
|---|
| |