| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2681 |
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| Symbol | |
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| ID | 8326870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 3021545 |
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| End bp | 3026995 |
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| Gene Length | 5451 bp |
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| Protein Length | 1816 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644943221 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003100462 |
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| Protein GI | 256376802 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | [TIGR00128] malonyl CoA-acyl carrier protein transacylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.909004 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAAAACG AGGCAAAGCT CCTGGGCTAC CTGAAGCGGG CCACCGCCGA CCTGCGCGAG
GCGCGGCGCA GGCTCCGCGA GGTGGAGCGC AGGGAGAACG ACCCGATCGC CCTCGTCGGC
ATCGGCTGCC GGTTCCCCGG CGGGGTCACC GGACCCGACC GGTTGTGGGA CCTGGTGGCG
GGCGGCGTGG ACGCGGTCTC CTCGTTCCCC ACCGACCGGG GCTGGGAGCT GGACTCGCTC
TACGACCCCG ACCCGGACAA GCGCGGCCAC AGCTACGCCA TGGCGGGCGG GTTCCTGCAC
GACGCCGCCG ACTTCGACGC CGCCTTCTTC GGCATCTCCC CGCGCGAGGC CACCGCGATG
GACCCGCAGC AGCGCCTGCT GCTGGAGACC GCGTGGGAGG CGTTCGAGCA CGCGGGCATC
GACCCCACCA CGCTCAAGGG CAGCCGCACC GGCGTCTACG CGGGCCTGAT GTACCACGAG
TACACCTCGC GCCTGACCAC CGTGCCCGAG GAGTTCGAGG GCTTCATCGG CAACGGCAAC
GCGGGCAGCG TGTTCACCGG CCGCGTCGCC TACGCGCTCG GCCTGGAGGG CCCGGCGGTC
ACCGTGGACA CCGCGTGCTC CTCGTCGCTG GTGTCGATCC ACCTGGCCGT GCAGGCGCTG
CGCCGCGACG AGTGCTCGCT CGCGCTGGCG GGCGGCGTCA CCGTGATGCC CTCGCCCGAG
ACGTTCGTGG ACTTCTCCCG GCAGCGCGGC CTCGCCCCCG ACGGGCGCTG CAAGCCGTTC
TCCGACGACG CGGACGGCAC CGGCTGGTCC GAGGGCGCGG GCGTGCTCGT GCTGGAGCGG
CTGTCCGACG CGCGCCGCAA CGGCCACCGG GTGCTCGCCG TCGTGCGCGG CACGGCGGTC
AACCAGGACG GCGCGTCCAG CGGCCTGACC GCCCCGAACG GCCCGTCGCA GCAGCGCGTC
ATCCGCGCCG CGCTGGCCAA CGCCGGGCTG TCCGCCGAGC ACGTGGACGT CGTGGAGGCG
CACGGCACCG GCACCTCCCT CGGCGACCCG ATCGAGGCGC AGGCCGTGCT CGCCACCTAC
GGCCAGGACC GCGAGCACCC CCTGCTGCTC GGGTCGATCA AGTCGAACCT CGGCCACACC
CAGGCCGCCG CGGGCGTCGC GGGCGTGATC AAGGTGGTCA TGGCCATGCG GCACGGCACC
GTGCCCAGGA CGCTGCACGT GAGCGCCCCC ACCACGCACG TGGACTGGAC CGCCGGGTCG
GTCCGGCTGC CGCTGGAGGC CACGCCGTGG CCGGAGACCG GGCGCCCGCG TCGCGCGGGC
GTGTCCTCGT TCGGCATCAG CGGCACCAAC TCGCACGTCG TGCTGGAGCA GGCCCCCGCC
CCGCAGGCCG CCGAGGTCCC CGCGCCGGAC GCCGCCGCCG GGACCGCCGA GGCCGAGCTG
CCGCGCGTGG AGACCGACGT CGTGCCGTGG GTGCTGTCCG CCCGCACGCC CGAGGCGCTG
GCGGCCCAGG TCCGCAGGCT CCGCGGTGCG GCGCAGGGGC TCGACCCGGT CGACGTGGCC
TTCTCGCTGG CCACCACCCG CGCCCACCAC GAGCACCGCC TCGCCGTCAT CGGCCGCACC
GCCGAGGACT TCGCCGCCGC CCTCGCCGAG GGCGCGCCGG GCTCGGTGCG CGGCGTCGCG
GACAAGGGCC GCACCGCGTT CCTGTTCACC GGCCAGGGCT CCCAGCGGAT CGGCATGGGC
CGCGAGCTGC GCGCCGCGTT CCCGGTGTTC CGCGAGGCGT TCGACGCCGC GTGCGCGCTG
CTGGACCGCG AGCTGGAGGT CTCGCTCGCG GACGTCGTGC TCGGCGAGGA CCGGGAAGCG
CTGGACCGCA CCGGTTTCAG CCAGCCCGCG CTGTTCGCGT TCGAGGTCGC GCTCTACCGG
CTGCTGGAGT CCTGGGGCGT CACCCCGGAC TTCGTCGCCG GGCACTCCAT CGGCGAGATC
GCCGCCGCGC ACGTCGCGGG CGTGTTCTCC CTGGAGGACG CCTGCGCGCT GGTCGTGGCG
CGCGGCCGGT TGATGCAGGC GCTGCCGTCC GGCGGCGCGA TGCTCGCCGT GGAGGCCACC
GAGGCGGAGG TCCTGCCGCT GCTGAACGAC CGCGTCGGCC TGGCCGCCGT CAACGGCCCC
AGCGCCGTGG TCGTCTCCGG CGCCGAGGCC GCCGTCGACC AGGTCGCCGC CGCGCTGGAC
GGCAGGCGCA CCAAGCGGTT GCGCGTCTCG CACGCCTTCC ACTCGCCGCT CATGGAGCCG
ATGCTGGACG AGTTCCGCCG CATCGCCGAC AAGGTCTCCT TCCACGAGCC GCTCATCCCG
TTCGCCTCCA CCTCGACCGG CGGCCCGGCC ACCGACGCCG TCGCCACCGC CGAGTACTGG
GTCTCCCACG TCCGCGACAC CGTGCGCTTC CACGCCTGCC TGGAGCACCT GGCCGGGCAC
GGCGTCACCC GGTTCGTGGA GGTCGGCCCG GACGGCGTGC TCACCGGCAT GGTCGAGCGC
GGCGCGGCCG TCGCCACCCA GCGCCGGGGC CGCGACGAGG TCGTCGCCCT CACCACCGGC
CTCGCCGCCG CGTTCGCGCA CGGCGTCGAC GTGGACTGGG CGGCCTTCCA CGCCGGGCGC
GGCGGGCAGC GCGTCGACCT GCCCACCTAC GCCTTCCAGC GCAAGCGCTA CTGGCTGGAG
TCCGACGGCC CGTCCGGCGA CGCCACCTCG TTCGGCCTGC AGGGCGGGGA GCACCCGCTG
CTGACGGCGG TCGTGGAGAC CCCGGCCAGC GACGGCGTCG TGCTCACCGG CAGGCTCTCC
GCGGGCACCC ACGCCTGGCT CGCCGACCAC GCCGTGCACG GCACCCCGAT CGTCCCCGGC
ACCGGCCTGG TCGAGCTGGC CGTCCGCGCG GGCGACCAGG TCGGCTGCGA CCTGGTGGAG
GAGCTCACCC TCGAAGCGCC GCTGCCGCTG CCCGAGAGCG GCGCGCTGGC GCTGCGGGTC
ACCGCCGACG CCCCCGACGA GCACGGCCGC CGCACCCTGG CGATCCACTC CCGCCCCGAG
GGCGCCCAGC CCGGCGAGGA GTGGACCCGG CACGCCTCCG GCCTGCTCGG CACCGCCCGC
GACAGCGCGC CCGAGCAGCT GACCGCGTGG CCGCCGGAGG GCGCGGAAGC CGTTGACCTG
GAAGGGTTCT ACCCGCGCCT GGCGGACAAC GGCTACGGCT ACGGCGAGGT CTTCCGGGGC
CTGCGCGCGC TGTGGCGGCG GGCGGACGGC GAGCTGTTCG CGCACGCCGT GCTGCCCGAG
TCCGCGCACG CCGACGCCGC CCGCTTCGGC CTGCACCCGG CCCTGCTCGA CGCCGCGCTG
CACGCCAACC TCGCGGACGG CTCCGAGGAG CGCACCCCGC TCCCGTTCGC CTGGAACGGC
GTCACCCTGC ACGCGCAGGG CGCCACCGAG CTGCGGATCC ACATCACCCA GACCGGCCCC
GACCAGCTCT CCGTGGCGGT CGCGGACGGT CAGGGCGCGC CGGTCGCCAC CATCGCGCAG
CTCGTCGTGC GCCCGGTCTC CGCCGAGCAG CTCGGCGGCA CGGCCGGTCG CGGCTACCAC
GAGTCGCTGT TCCGGCTGCG CTGGACGCCC GCCAAGGCGG GCGCCGTCCC GGTGCCGACC
GCCGAGGACT GGGCCGTGCT GGGGCAGTGG CCCACCACCA CCGCGACCGC GCACGCCGAC
CTGGCCGCGC TGCGCGCCCA CCTGGACGGC GGCGCCCCGC CGCCCGAGGT CGTGCTCGCC
CCGATCGCCC CCGCGTCGCA GGTGTCGCCG GGCGACGTCC CCGCCGAGGT CCGCGGGTCC
ACCCACGCCG CGCTCGCGCT GCTCACCGGC TGGCTCGCCG ACGACCGCCT CACCGGCTCG
CGCCTGGTGG TGCTGACCCG CGCCGCCGTC CCCGCCGACC CGACCCGCGC CCCGCTGTGG
GGCCTGCTGC GCGCCGCGCA GGCGGAGAAC CCCGGCCGCT TCACGGTCGT CGACGTCGAA
CCCGGCTCCG AGGACCTGCT GCCCGCCGCG ATCGGCACCG ATGAGCCCGA GCTGGCCCTG
CACGAGGGCA AGATCCTCGT GCCGCGCCTG CACCGCGCCG TGCTGCCCGA GACCACCGCC
TCCACCTGGC GGCCGGACGG CACCGTCCTG ATCACCGGCG GCACCGGCGG CCTCGGCGGG
CTCCTGGCCC GCCACCTGGT CACCGAGCAC GGCGTCACCC ACCTGCTGCT CACCAGCCGC
CGGGGCCGGG GCGCGCCCGG CGCGGCCGAG CTGGAGGCCG AGCTGGAGAA CCACGGCGCG
CAGGTGGACA TCGCCGCCTG CGACGCCTCC GACGCCGACG CGCTCACCGC GCTGCTCGCC
ACGATCCCGG CCGAGCACCC GCTCACCGCC GTCGTGCACG CCGCCGGTGT CGTCGACAAC
GCCCTCCTCG CCGACCTGAC CCCCGAGCAG GTCGACGCGG TGCTGCGCGC CAAGGTCGAC
TCCGCCTGGA ACCTGCACCG GCTCACCGAG GGCCTGGCCG CGTTCGTGCT CATCTCCTCC
TCGGCGGCCG TGGTCGCGGG CGCCGGTCAG GCCAACTACG CCGCCGCCAA CGCGTTCCTG
GACGCCCTGG CCGAGCACCG CCGCGCCCAC GACCTGCCCG CGACCTCGCT CGCGTTCGGC
CTGTGGGCGG GCAGCGGCAT GGGCGCCGAC CTGGACGACG CGGACCTGCG CCGCATGGAG
CGGCTCGGGA TGCCCGCGCT GCCGCCCGCC GAGGGCCTCG CCCTGTTCGA CGCCGCGCTC
GCCACCGACG AGGCCGCGCT CGTGCCGATG CGGGTGGACC TGATGGCGCT GCGGGCCCGC
GTGGACGACC TGCCCGCCGT GCTGCGCGGC CTGGTCCGGG TCCCGGCCCG GCGCGCCGCC
CTCACCGCGT CCGGCGCCGA CGCCCGGCCG CTGGCCGACC GCCTCGCCGG GCTGCCCGCC
GTCGAGCGCG AGCAGCTCCT GCTCGACCTG GTGCGCGCCC ACGCCGCCTC CGTCCTCGGC
CACGCCGGGG TCGAGGAGGT CACGCCCACC AGGGCGTTCA AGGAGCTCGG CTTCGACTCG
CTGGCCGCCG TCGAGCTGCG CAACCTCCTC GGCGCGGCCA CCGGGCTGCG GCTGCCCGCC
ACCGCGGTCT TCGACCACCC CTCGCCGCAG GCGCTCGCCC GCGAGCTGCT GGGCCAGCTC
GTCGTGGAGG AGGACCACGC GCGGTCCGTC CTCGCCGAGG CCGACCGGCT GGAGGCCGCG
CTCGCCTCGG TCGCCGACGA GGACGCGGCC AGGGTCACCG CCCGCCTGGA GGCGCTGCTG
CGCACCTGGC ACGACGCGCG CGGCCGAGCC GAGGACGCGG GGCACGACCT CGGCGAGGCC
ACCGACGAGG AGCTGTTCGC GGTGCTCGAC AACGAACTCG GCATCTCCTG A
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| Protein sequence | MENEAKLLGY LKRATADLRE ARRRLREVER RENDPIALVG IGCRFPGGVT GPDRLWDLVA
GGVDAVSSFP TDRGWELDSL YDPDPDKRGH SYAMAGGFLH DAADFDAAFF GISPREATAM
DPQQRLLLET AWEAFEHAGI DPTTLKGSRT GVYAGLMYHE YTSRLTTVPE EFEGFIGNGN
AGSVFTGRVA YALGLEGPAV TVDTACSSSL VSIHLAVQAL RRDECSLALA GGVTVMPSPE
TFVDFSRQRG LAPDGRCKPF SDDADGTGWS EGAGVLVLER LSDARRNGHR VLAVVRGTAV
NQDGASSGLT APNGPSQQRV IRAALANAGL SAEHVDVVEA HGTGTSLGDP IEAQAVLATY
GQDREHPLLL GSIKSNLGHT QAAAGVAGVI KVVMAMRHGT VPRTLHVSAP TTHVDWTAGS
VRLPLEATPW PETGRPRRAG VSSFGISGTN SHVVLEQAPA PQAAEVPAPD AAAGTAEAEL
PRVETDVVPW VLSARTPEAL AAQVRRLRGA AQGLDPVDVA FSLATTRAHH EHRLAVIGRT
AEDFAAALAE GAPGSVRGVA DKGRTAFLFT GQGSQRIGMG RELRAAFPVF REAFDAACAL
LDRELEVSLA DVVLGEDREA LDRTGFSQPA LFAFEVALYR LLESWGVTPD FVAGHSIGEI
AAAHVAGVFS LEDACALVVA RGRLMQALPS GGAMLAVEAT EAEVLPLLND RVGLAAVNGP
SAVVVSGAEA AVDQVAAALD GRRTKRLRVS HAFHSPLMEP MLDEFRRIAD KVSFHEPLIP
FASTSTGGPA TDAVATAEYW VSHVRDTVRF HACLEHLAGH GVTRFVEVGP DGVLTGMVER
GAAVATQRRG RDEVVALTTG LAAAFAHGVD VDWAAFHAGR GGQRVDLPTY AFQRKRYWLE
SDGPSGDATS FGLQGGEHPL LTAVVETPAS DGVVLTGRLS AGTHAWLADH AVHGTPIVPG
TGLVELAVRA GDQVGCDLVE ELTLEAPLPL PESGALALRV TADAPDEHGR RTLAIHSRPE
GAQPGEEWTR HASGLLGTAR DSAPEQLTAW PPEGAEAVDL EGFYPRLADN GYGYGEVFRG
LRALWRRADG ELFAHAVLPE SAHADAARFG LHPALLDAAL HANLADGSEE RTPLPFAWNG
VTLHAQGATE LRIHITQTGP DQLSVAVADG QGAPVATIAQ LVVRPVSAEQ LGGTAGRGYH
ESLFRLRWTP AKAGAVPVPT AEDWAVLGQW PTTTATAHAD LAALRAHLDG GAPPPEVVLA
PIAPASQVSP GDVPAEVRGS THAALALLTG WLADDRLTGS RLVVLTRAAV PADPTRAPLW
GLLRAAQAEN PGRFTVVDVE PGSEDLLPAA IGTDEPELAL HEGKILVPRL HRAVLPETTA
STWRPDGTVL ITGGTGGLGG LLARHLVTEH GVTHLLLTSR RGRGAPGAAE LEAELENHGA
QVDIAACDAS DADALTALLA TIPAEHPLTA VVHAAGVVDN ALLADLTPEQ VDAVLRAKVD
SAWNLHRLTE GLAAFVLISS SAAVVAGAGQ ANYAAANAFL DALAEHRRAH DLPATSLAFG
LWAGSGMGAD LDDADLRRME RLGMPALPPA EGLALFDAAL ATDEAALVPM RVDLMALRAR
VDDLPAVLRG LVRVPARRAA LTASGADARP LADRLAGLPA VEREQLLLDL VRAHAASVLG
HAGVEEVTPT RAFKELGFDS LAAVELRNLL GAATGLRLPA TAVFDHPSPQ ALARELLGQL
VVEEDHARSV LAEADRLEAA LASVADEDAA RVTARLEALL RTWHDARGRA EDAGHDLGEA
TDEELFAVLD NELGIS
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