| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2512 |
|---|
| Symbol | |
|---|
| ID | 8326701 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 2822336 |
|---|
| End bp | 2826223 |
|---|
| Gene Length | 3888 bp |
|---|
| Protein Length | 1295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | 644943055 |
|---|
| Product | VWA containing CoxE family protein |
|---|
| Protein accession | YP_003100296 |
|---|
| Protein GI | 256376636 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2425] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.686285 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGACC GGCTGGCCGA CCACCGCGAG CCCGTGCTGA TCGGGGTCCG CCACCACTCG
CCCGCGCTCG CCGCCGCGAT GCCCGCGCTG CTGGAGGCCG CCGACCCCGA GGTCCTGCTG
GTGGAGCTGC CGCAGGAGCT GGGGGAGTGG CTGCCGCACC TGGCCGACCC CGACCTGCTC
GCGCCGGTCG CCCTGTCCGG GGCGGCCCGC GACGGCGGCT CGCTCGCGTT CTACCCGTTC
GCGGACTTCT CCCCGGAGCT GGCCGCGATC CGCTGGGCGC GCCGCAACGG CGTCGAGGTG
CGGCCGTGCG ACCTGCCGAT CGCGCTGCGC GGCGACGACC ACCGGGGTGG GCACGACCAC
GGCACCCCGC TGGCCGACGC GCTGCGCGGG GTGATCACCG GGCGGGACGG CGACGACCTG
TGGGACCGCC TGGTCGAGGC CGCCGCGCCC GGCCAGTCGC CCGAGTCGGT GCGCCGCGCC
GCGCTGCTGG TCGGCCTGGC GCTGCGGCGT GACGCGGAGG GCCCGGACGG CGACGGCGTC
GGCGGGTTCG ACCTGCGCCG CGAGGAGTGG ATGCGGCACG CCGTCGCCGA CGTCGCGGGG
TGCCGCTCGG CCGCCGTCGT CGGCTCGTTC CACGCCGCCG CCCTGCTGCG AGGCCCGGAC
GGCGACCGCC CGACCGGCAG CGGGCCGGAG GTGGTGACCT CGCTGGTGCC GTACGGGTTC
GCGCTGCTGG ACGAGCGCTC CGGCTACCCG GCGGGCATCC GCGACCCGGA GTGGCAGCAG
GCCGTCTACG AGTCGGGCGG CGACGCGGCG GCCGTGGAGT CCTCGGCCGC GGCGTTCGTC
GTGCGGATCT GCGCGCGCGT GCGCGAGCTC GGCCACCCGG CGGGTCCCGG CGAGGCGCGC
GAGGCGCTGC GCCTGGCGGT CGACCTGGCC AAGCTGCGCG GACTGCCCGC GCCGGGCCGG
GGCGAGCTGG TGGAGGCGGT GCAGAGCGTG CTCACCCACG CCGAGCCGCT CGGTCGCGGC
CGGGTCGTGG CCCGCGCCGC CGGTGACGTG CTGGTCGGCC AGCGGCTCGG CCTGCTCGCC
CCCGGCACCC CGCGCTCGGG CCTGGCCCCC GCCGTGGAGG CGCTGGTGCA GGAGCTGCGG
CTGCCGGGTC CGGGCTCGAC CGAACCGGTG CAGCTGCGCC TGGACCCGCT GCGCTCGCCG
CTGGACGCGC GCCGCGAGGT CGCCCTGCGC AGGCTGGACG CGCTCGGCGT GCCCTACGGC
GGCGAGACCG CGACCACCGG CGTCGGCGGC GGCGAGGCGC TGACCACCCG GTGGACCGTC
GCGTGGACGC CCGCCACGGC CGCGACCCTG CCCGTCGCGG GCATGTGGGG GGCGACCCTG
GAGCTGGCGG CGCGCGGCAG GCTCATGGCC CGCCGCGCCG AGCGCGAGCG CGGCGGTGGC
CACACCCCCG CCGAGGTGCT CGCCGACCTG GCCGAGGCCG CCGCGTGCGG CCTGCCGGAC
GTGGTCGGCG TGCTGCTGGA CGACGCGGCG GCCGTGCTGC CCACCTCGGG CACCCTGCAC
GACCTGCTGG CCGCGCTGTC CCTGCTGGAC CGGTTGCGCG CCGGGCACCT GCCGGGCACG
CCCGGCGAGG TGCTGGACGG GCACCCGGTG CTGTCCCGCG ACCTGGAGAC GGCGGCGGTG
GCCCAGCTGG AGGGCCTGGC CGGGTCCGAC GACCCGGCCG ACGCGCGGGC GCTGGTCGAG
CTGGGCCAGC GGCACGACGC GCACGGCACC GGTGTGCGGC TGGCCGTGGC GCTGCGCGAG
CTGTCGGACG GCGCGGGCCC GCTCATCGCG GGCGCGGCCG GGGCCACCAG GGTCCTGCTG
GGCCTGGCCG AACCGGCGGA GCTGGGCGAG CGCGTCGCGT CCTGGATCGA CACCGCAGGC
ACCCCGGAGG GCAGGGACGC GCTGAAGCGC GCCCTGACCG GCGTGCTCGC GGCGGCCACC
GCCCTGCTGG AGACCACCGA GGCCCTCGAA CCGCTGCTGG ACCGGGTGGA GTCGCTGGCC
GACCGGGCCT TCCTGGACCG CCTGCCCGCA CTGCGCGGCG CGTTCACCAC CATCGGCCCG
GCCGCCCGCG CGCGGGTGCT GGCCGTGGTG CAGGAGCGGG TCGGCGCGCG GGTGGACCGG
GCCGGTGACC CGGACCCGGA GCTGCTGGCG CTGTGGCTGG GGGCCGAGCG GGAGGCTGCG
GAGGCGCTGC GCCTGCACGG GCTGACCGGG ACGGTGGCCG GTGGGGGCGG TGCGGGCGCG
GTGGAGGCCG CGGCGGTCGC GAGCACGGCG GTGGGTGGCG CTGTGACGGG TGCTGACGTG
GCGGCGGGCC CTGCGGCGAC GACTGCTGCT GGGGCAACCG GCGCTGCTGC GGCGGGTGGC
GCTGCGGTGG CGGGTGGCGC TGCGGCGGCA ACCGGTTCCG CCGCGGGTGG CCCAGCCGCC
GACGCGCTTC CGCCGCCGAC CTCGTCGGCG GCCACCACAA CGGCGGTCGG CGTGTCCGCC
TCGGCGTCCG AGCCGGGTGT AAGCGCTCCC ACGAGCGGGG ATGGCGCCGG GGCTCCCGGC
GCCGCCGGGG CGGGCCCGCT TGCCGGGCCG GGCGGCGAGG CTGGTTCCGC CGGCTCGCGA
GCCGCGGGCG GTGACACCGT CGGCCGGGAA GCGCCCGGTG CGGTCGCGGT CGGCGGTGGA
GAGGCTGCCG CCGACCCCGC CGACCCCGCC GTCGCCGACC TCGGCCCGGT CGGCGCGGAG
GGGGCCGAAA CCGCCATCCC CGCCGAACTC CCCCCGGTGC TGCGCTGGCG GCTCCTGCTC
GGCGCGCGCG GAGACCGCCC GGCGGGTGGT GGCCGGTACG CCGCCGCGCT GGACGAGCTC
TACGGCCACG ACCGGGGCGA GGGCGCGGAC AGCGGGTCGC TCGGTGGCAG CGCGGGCGGC
GACGGGGACC CGTTCCCGGT CGTGCGCGAG TGGTCCGACG AGCTCAAGGC CCTGTTCGGC
GACCGGGTCC GCGAGGAGGT CCTGGCCGCC GCCGCCGAGG GCGGCAGGCT GGAGGCCGCG
CTGGAGATCG ACCCGACCTC CGTGCGCCCC TCGGTCGACC TGCTGCGCAA CGTCCTGTCC
CTGGCGGGCG GCCTCTCCGA GGACGCGCTC GCCCGGTTGC GCCCGCTGGT GGCGCGGCTG
GTCCGCGAGC TGGCCGAGCA GCTGGCCAAC CGGATCAGGC CCGCCCTGAC CGGGATGCAG
CTGCCGTTCC CCACCCGCCG TCCCGGCGGC AAGCTCGACC TGCCCCGCAC TCTCAGGGCG
AACCTGGCCA CGGCCCGCCG AGACGAGCAC GGCAAGGTCG TCGTCATCCC CGAGCGCCCG
GTGTTCCGCA GCCGGGGCCG CAAGGCGAAC GACTGGCGGC TGATCCTCGT GGTCGACGTG
TCGGGCTCGA TGGAGGCGTC CACGGTGTGG GCGGCGCTCA CCGCGTCCGT GTTCGCGGGC
GTGCGGTCGC TGACCACGCA CTTCCTGGCG TTCTCCACCC AGGTGGTCGA CCTGAGCGAG
CGGGTCGCCG ACCCGCTGTC GCTGCTGCTG GAGGTCAAGG TCGGCGGTGG CACGCACATC
GCGGGCGCGC TGCGGCACGC CCGCGACCTG GTGACCGTGC CGGAGAGGAC GATGGTGGTG
CTGGTCAGCG ACTTCGAGGA GGGCGGGCCG GTCGCCTCGC TCACCGCGCA GGTGAGGGAG
CTGGTGTCCG CCGGGGTGAC GGTGCTGGGC TGCGCGAGCC TGGACGACAC CGGTCAGCCC
CGCTACTCCA CGTCGGTCGC GGGTTCGCTG GTGGCCGCCG GGATGCCGGT GGCCGCGCTG
AGCCCGCAGG AGCTGGCCCG CTGGGTCGGG GAGAAGGTGC GCGGATGA
|
|---|
| Protein sequence | MADRLADHRE PVLIGVRHHS PALAAAMPAL LEAADPEVLL VELPQELGEW LPHLADPDLL
APVALSGAAR DGGSLAFYPF ADFSPELAAI RWARRNGVEV RPCDLPIALR GDDHRGGHDH
GTPLADALRG VITGRDGDDL WDRLVEAAAP GQSPESVRRA ALLVGLALRR DAEGPDGDGV
GGFDLRREEW MRHAVADVAG CRSAAVVGSF HAAALLRGPD GDRPTGSGPE VVTSLVPYGF
ALLDERSGYP AGIRDPEWQQ AVYESGGDAA AVESSAAAFV VRICARVREL GHPAGPGEAR
EALRLAVDLA KLRGLPAPGR GELVEAVQSV LTHAEPLGRG RVVARAAGDV LVGQRLGLLA
PGTPRSGLAP AVEALVQELR LPGPGSTEPV QLRLDPLRSP LDARREVALR RLDALGVPYG
GETATTGVGG GEALTTRWTV AWTPATAATL PVAGMWGATL ELAARGRLMA RRAERERGGG
HTPAEVLADL AEAAACGLPD VVGVLLDDAA AVLPTSGTLH DLLAALSLLD RLRAGHLPGT
PGEVLDGHPV LSRDLETAAV AQLEGLAGSD DPADARALVE LGQRHDAHGT GVRLAVALRE
LSDGAGPLIA GAAGATRVLL GLAEPAELGE RVASWIDTAG TPEGRDALKR ALTGVLAAAT
ALLETTEALE PLLDRVESLA DRAFLDRLPA LRGAFTTIGP AARARVLAVV QERVGARVDR
AGDPDPELLA LWLGAEREAA EALRLHGLTG TVAGGGGAGA VEAAAVASTA VGGAVTGADV
AAGPAATTAA GATGAAAAGG AAVAGGAAAA TGSAAGGPAA DALPPPTSSA ATTTAVGVSA
SASEPGVSAP TSGDGAGAPG AAGAGPLAGP GGEAGSAGSR AAGGDTVGRE APGAVAVGGG
EAAADPADPA VADLGPVGAE GAETAIPAEL PPVLRWRLLL GARGDRPAGG GRYAAALDEL
YGHDRGEGAD SGSLGGSAGG DGDPFPVVRE WSDELKALFG DRVREEVLAA AAEGGRLEAA
LEIDPTSVRP SVDLLRNVLS LAGGLSEDAL ARLRPLVARL VRELAEQLAN RIRPALTGMQ
LPFPTRRPGG KLDLPRTLRA NLATARRDEH GKVVVIPERP VFRSRGRKAN DWRLILVVDV
SGSMEASTVW AALTASVFAG VRSLTTHFLA FSTQVVDLSE RVADPLSLLL EVKVGGGTHI
AGALRHARDL VTVPERTMVV LVSDFEEGGP VASLTAQVRE LVSAGVTVLG CASLDDTGQP
RYSTSVAGSL VAAGMPVAAL SPQELARWVG EKVRG
|
|---|
| |