Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2484 |
Symbol | |
ID | 8326673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 2768704 |
End bp | 2770383 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644943029 |
Product | von Willebrand factor type A |
Protein accession | YP_003100270 |
Protein GI | 256376610 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000228446 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCGGGCGG TGAGCGGGGT TCGGCGGGGG TTTGATCTCA CGCGGCGGGG GTTTGATTCC ACGCGACAGG GTTTCAGGCG GCAGGGTTTC AGGCGGCAGG TCGCGGTCGG GCTGGTGCTC GTCGCGCTGG CGGGCTGCAC GGCCGAGCAG GCCGCACCCG AGGGCGAGCC CTCGCTGCGC GGTGTCCCGA CGACGTTGCG GGTGCTGGCG GGCAGCGAGC TGGCCGACAT GGCGCCGGTG CTGGAGGAGG CCGAGCGGGC CACCGGGGTG AAGGTCGAGT TCACCTTCAC CGGCACGCTC GACGGGGCGC AGAAGGTCGC CGAGGGCAAG GCGGACGGGG CGCACGACGC GGTGTGGTTC TCGTCCACCA AGTACCTGCG GAGCCTGCCC GAGGCGCGCG GCAGGCTCGG GGCCGAGGTG CAGGTGATGT CGTCGCCGGT GGTGCTCGGG CTCCGGCAGT CGGCCGCGCG CGAGCTGGGG TGGGCGGACG GGAACGTCAC GTGGGGTGGG ATCGCCGAGG CCGCGGGGGC CGGGCGGTTC ACGTTCGCGA TGACCGACCC GGCCGCGTCG AACACCGGGT TCTCGGCGCT GGTCGCGGTG GCGACGGCGC TGGACGGGAG CGGACGGGCG CTGGACACCG GGGCGATCGA GCGGGTCGCC GGGCCGGTGT CGGGGCTGTT CACCGGGCAC CGGATCACGG CCGGGTCGTC GGACTGGCTG GCGGACGCGT TCATGAAGCG GGCCAAGGGG GAGGACGCGG GCGGGCCGGT CGACGGGCTG ATCACGTACG AGGCGTCGTT GTCGTCGTTG AACTCGGGCG GGGAGCTGCC CGAACCGCTG GTGCCGCTGT ACCCGAGCGA CGGGGTGGTG AGCGCGGACT ACCCGCTGGC GGTGCTGTCG GGGGCGGACG AGCGGGCGCG CGACGCGCAC CGACGGCTCG CGGACCACCT GGTGCGGGCG GAGGTGCAGC GGGAGATCGT GGCGAAGACC GGGCGGCGGC CCGCCGTGGC CGGGCTGGAC CTGCCCGCGG GGGCGCGGTC GGGGCTGGTG GAGATCCCGT TCCCGGACAG CCGGGCGGTG GTGGGGGCGT TGCTGGACGC GTACTACGAC GAGCTGCGGC GGCCGTCGCG GACGGTGTAC GTGCTGGACG TGTCCGGGTC CATGGAAGGG GACCGGATGG CGCAGCTGAA GCGGGCGCTG AGCCGGTTGA CCGGGTCCGA CGAGTCGTTG ACGGGGCAGT ACTGCCGGTT CCGGAGCCGG GAGGAGGTGG TGCTGCTGCC GTTCAACCAG GCGCCGCTCG CGCCTCAGGA GTTCAGCGTG GACGTGGGGG CGCCGCGGGA GACGTTGGAG CGGATCCGAG GGGCGGTCGA GGGGCTGGTC GCTGGGGGTG ACACGGCGGT GTACGACAGC CTGGAGCGGG CGTACGGGGT GGTGGGGAGC TCGCCGGAGC GGTTCACGAG CGTGGTGCTG ATGACCGACG GGGAGAACCG GGTGGGGCGG ACGTTCGCGG AGTACCGGGA GTTCGCTCGG GGGAAGGCGG TTCCGGTGTT CCCGATCGTG TTCGGTGAGG CTTCTCGGGC GAAGATGGGG GAGATCGCGG AGATCACGGG TGGGGCGGTG TGGGACGCGA ACTCGGAGTC GTTGGAGCGG GCGTTCTGCC AGATCCGGGG GTATCAGTGA
|
Protein sequence | MRAVSGVRRG FDLTRRGFDS TRQGFRRQGF RRQVAVGLVL VALAGCTAEQ AAPEGEPSLR GVPTTLRVLA GSELADMAPV LEEAERATGV KVEFTFTGTL DGAQKVAEGK ADGAHDAVWF SSTKYLRSLP EARGRLGAEV QVMSSPVVLG LRQSAARELG WADGNVTWGG IAEAAGAGRF TFAMTDPAAS NTGFSALVAV ATALDGSGRA LDTGAIERVA GPVSGLFTGH RITAGSSDWL ADAFMKRAKG EDAGGPVDGL ITYEASLSSL NSGGELPEPL VPLYPSDGVV SADYPLAVLS GADERARDAH RRLADHLVRA EVQREIVAKT GRRPAVAGLD LPAGARSGLV EIPFPDSRAV VGALLDAYYD ELRRPSRTVY VLDVSGSMEG DRMAQLKRAL SRLTGSDESL TGQYCRFRSR EEVVLLPFNQ APLAPQEFSV DVGAPRETLE RIRGAVEGLV AGGDTAVYDS LERAYGVVGS SPERFTSVVL MTDGENRVGR TFAEYREFAR GKAVPVFPIV FGEASRAKMG EIAEITGGAV WDANSESLER AFCQIRGYQ
|
| |