Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2478 |
Symbol | |
ID | 8326667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 2749604 |
End bp | 2750794 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644943023 |
Product | Peptidoglycan-binding domain 1 protein |
Protein accession | YP_003100264 |
Protein GI | 256376604 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000277513 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACACCCG TGCAGCCGGA CGCCCGGTTC GCCGCCTACC TGAGAATGCT CAAGGAGCGG AGCGGGCGCG GGTTCGACCG GCTGGGCAAG CAGGCCGGGG TCAGCGGGTC CAGTCTGCAC CGGTACTGCT CCGGGGCCAG CGTGCCCCCC GACTACCGGA TCGTGCACAG CTTCGCCAAG GCGTGCGGCG CCACCGGTGA GGAGCAGCGG GAGCTGCACC GGCTGTGGGC GCTGGCCGAC CTGTCCAGGG GCAGCCGGGG CGAGGGCGTG GACGGCGGGG AGGGCGCTGC CGCGGTTCGC GATTCCGAAG GGAAATCGTC CGAGGGGTTC GCGGGGATTC CGGAACGGGC TGTTCCGGAA ACGCGCGCGG AGCGCTCGGG CGTCGAATCG GGAATCGGTG GGGCTGAAAC TCCGGGTTCG GCGGGAAAAG CGCCGGAAAC GGGAGGCGCG CGCTCGACCG GGGTTCCGCG CGGGACCGGT GAGGCGGTGG TGGCGCCGGG CTACCCGGAG GTCATCAGCC TCACCGGGCG GGCGCCCCGC GCGCGGGGGT GCCGGGCGCC CCGGCGGCTG CTCGGGCTCC TCGCGCTGGC CGCCGTGGCG CTGGTGGTGG CGTCGGTGGC GCTGTGGCCG CGCGGCGGGA CCCCGGAGGT GGACGACCGG CTGCTGTTCT CCCCGGCGTG CGACGCGGTC GTCATGGGGC AGCACGACAG CTGCGTGCGC GAGCTGCAGC AGCTGCTGGT GCGGGCGCGG GCGCGGATGT CCGTGGACGG CTCGTTCGGG CCGGAGACGC TGCGGCGGCT CACCGCGTTC CAGGTGCTCG CCGGGCTGGA GCCCAGGGGA GTGGTCGACG CGGGGACCAG GGAGGCGCTC TACGCGGGGC GGGTGGACAT GTCCACGTGG ACGCCGGAGC GGGTGGAGCG GCGGGTGCGC GAGGTGTTCG CGCGGGAGCC CGACGCGGCC GTGGCGATCG CCCGCTGCAC CTCGTTCCTC GACCCGCTGT GGGTGCTGCC GAACACCAAC GGCAGCCGGA ACTGGGGCGT CTTCCAGATC TCGGACGGGC GGCTGCGCGA GCTGGGCGGC TCCCCGCTGG TGGCGTTCGA CCCGGAGTGG AACATCCAGG CCGCGCACCG GCTGTACGCG GCGCGCGGCG ACTTCGGCGA CTGGCGGGCG TGCCAGGCGG CGCTGCAGTA G
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Protein sequence | MTPVQPDARF AAYLRMLKER SGRGFDRLGK QAGVSGSSLH RYCSGASVPP DYRIVHSFAK ACGATGEEQR ELHRLWALAD LSRGSRGEGV DGGEGAAAVR DSEGKSSEGF AGIPERAVPE TRAERSGVES GIGGAETPGS AGKAPETGGA RSTGVPRGTG EAVVAPGYPE VISLTGRAPR ARGCRAPRRL LGLLALAAVA LVVASVALWP RGGTPEVDDR LLFSPACDAV VMGQHDSCVR ELQQLLVRAR ARMSVDGSFG PETLRRLTAF QVLAGLEPRG VVDAGTREAL YAGRVDMSTW TPERVERRVR EVFAREPDAA VAIARCTSFL DPLWVLPNTN GSRNWGVFQI SDGRLRELGG SPLVAFDPEW NIQAAHRLYA ARGDFGDWRA CQAALQ
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