| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2387 |
|---|
| Symbol | |
|---|
| ID | 8326576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 2647423 |
|---|
| End bp | 2647839 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644942932 |
|---|
| Product | RbsD or FucU transport |
|---|
| Protein accession | YP_003100173 |
|---|
| Protein GI | 256376513 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4154] Fucose dissimilation pathway protein FucU |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000121593 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCGCT ACCCGCTGCT GCACCCGCCC CTGCTCGCCG TGCTCGCCGC GTCCGGCCAT
GGCAGCAAGG TGCTCATCGC CGACTCGAAC TACGCCCACC GCACCAACGT CCACCCCGCC
GCCGAGATCG TGCACCTGAA CCTGACGCCG GGGCTGCTGA CCGTGGACCA GGTGCTCGCC
CCGGTGCTGA CGGCGGTCCC GGTGGAGGCG GCGCACGCCA TGCGGCCCGA CGAGGGCGGC
ACGCCGGAGG TGTGGGCCGA CTACGAGCGG CTGCTCGGGC CCGACCTGCC GCTCCAGCCT
CTGGCGCGGC AGGACTTCTA CGACACCTGC AAGTCGTCCG ACCTCGCGGT GTGCGTGGCC
ACCGGCGACA CCCGGCTGTA CGCGAACGTG CTGCTGACGA TCGGCTTCGT GGCGTAG
|
|---|
| Protein sequence | MLRYPLLHPP LLAVLAASGH GSKVLIADSN YAHRTNVHPA AEIVHLNLTP GLLTVDQVLA
PVLTAVPVEA AHAMRPDEGG TPEVWADYER LLGPDLPLQP LARQDFYDTC KSSDLAVCVA
TGDTRLYANV LLTIGFVA
|
|---|
| |