| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2262 |
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| Symbol | |
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| ID | 8326451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 2505398 |
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| End bp | 2506690 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644942807 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_003100048 |
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| Protein GI | 256376388 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0392628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACGGGC GCGAGGGAAC CGTGGTTGGA CGAAGCTGGT CACTATGGTC CCTTCCGAGG
GGCGCGCTGG GCTACGTGCT CTCGGTGGAC CTGCTCGCCC TGCTGGCCGT GGCCGCCGCC
GCGACGACGC GCCAGCCGAC GACCAGGCAC GACTGGGTCG TCCTCGCGGT GTTGCTCGCC
TGCGCAGCGC TGCACCTGGT CTTCTCCCGC TGGATCGAGC GCGCCCGCAG GGACGCGACC
GGCCTGCCGC ACCTCGACCT GTGCAGCATC TGGATATTCG CCGGTTCCCT GCTGCTCCCG
CCACCCCTGG TCGGAGTATT GGTGGTCGTG CTCTACGCCC ACCGCTGGTG GGTGGTCGGC
CGCTGGGACC CGTTCCGCCC GCCGCACCGG GGCGTGTTCA CCGCGGCGAT GATGCTCCTG
GTCGCCCTCG CCGCCAACGT CGTCGCCACC ACGACCGGCC TGCGCGAGAG CCTGGCCGCG
GGCCACCTCG AAGGCCCGTG GGACCTGCTC GGCCTGATGG GGGCGGGCTC GGTCTACTGG
ACGGTCAACA CCGCGCTCGT CGCGGGCGTC ATCGTGCTCA CCACCGGCGC GCGCACCAAC
CTGTTCGGCG GCCCGCTGGA CAACCTCCTG GAAGCCGCCC AGCTCAGCCT CGCGTTCTTC
GTCGCGCTCG CCGTGGCCTG GTGGCCCGGT TTCGCGCTGC CCATGGTCGT GGCCGCCGTC
GCCCTGCACC GCACCGTGCT GATCCACCAG CTGGAGCTGG CCGCCCGCAC CGACGCCAAG
ACCGGCCTGC TCAACGCCGA GGCCTGGCAC CTGCAGGCGC GCGTCGAGCT CAACCGCACC
CGCCAGCGCG GCGACGCGCT CGGCCTGCTC ATGATCGACG TGGACCACTT CAAGGGCATC
AACGACACCC ACGGCCACCA GACCGGCGAC GAGGTGCTGC GCTCCATCGC CGACGTCATC
CGCGAGTCGG TGCGCCGGGG CGACAGCGTC GGCCGGTTCG GCGGCGAGGA GTTCGTGGTG
CTGCTGCCCG GCGCGGGCCG CGACGAGTCG ATGGCCATCG CCGAGCGCGC CCGCTGCCGC
GTCGGCCTGC TGGGCACCGG CGCGGGCCCC GTGCGCGGCC TCACGGTCAG CGTCGGGGTG
GCCGTGTGGC CGGATGTGCC CGAGGACACC GTCGAAGGTC TCCTCGCCGC CGCCGACGGG
GCCCTCTACC AGGCCAAACG CCTCGGCCGT GACCAGAGCC GGGCGGCTTG GAGCCACCAG
GCGCCCTCGG TCCGCAGCGA TCAGGGCGGC TGA
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| Protein sequence | MDGREGTVVG RSWSLWSLPR GALGYVLSVD LLALLAVAAA ATTRQPTTRH DWVVLAVLLA
CAALHLVFSR WIERARRDAT GLPHLDLCSI WIFAGSLLLP PPLVGVLVVV LYAHRWWVVG
RWDPFRPPHR GVFTAAMMLL VALAANVVAT TTGLRESLAA GHLEGPWDLL GLMGAGSVYW
TVNTALVAGV IVLTTGARTN LFGGPLDNLL EAAQLSLAFF VALAVAWWPG FALPMVVAAV
ALHRTVLIHQ LELAARTDAK TGLLNAEAWH LQARVELNRT RQRGDALGLL MIDVDHFKGI
NDTHGHQTGD EVLRSIADVI RESVRRGDSV GRFGGEEFVV LLPGAGRDES MAIAERARCR
VGLLGTGAGP VRGLTVSVGV AVWPDVPEDT VEGLLAAADG ALYQAKRLGR DQSRAAWSHQ
APSVRSDQGG
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