Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2238 |
Symbol | |
ID | 8326427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 2474013 |
End bp | 2476481 |
Gene Length | 2469 bp |
Protein Length | 822 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 644942783 |
Product | protein of unknown function DUF214 |
Protein accession | YP_003100024 |
Protein GI | 256376364 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.249339 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCACGT CCCTGCGGCT CGCCATCGCC GAGCTGCGCG CGCACCCCGG CAGGGCGGTG CTGCCCGCCG TCGCCCTGCT CGTCGGCGTC GCCTGCCTGC TGGCGACCCT GCTCCTCAGC GACGCCATGG CGCGCTCCGC CGCCGAGGGC GCCCGCGCCC TGCCGACCGG CACCGACCTC GTCGTCCTGC CCGAGCCCTT CAGCGGCGGC AGGCTCGACC AGGCCATGGC CGACCGGATC GCCGCCGTCC CCGGTGTGCG CGAGGTCGTG CCCGAGCGGC GCGTCGAGCT GGACCTGCTC CTCGACGCGG GCCGCGCCAC CGAGGAGCGC ACCGTCGCCG ACGTCGACCC CGACGGCTCC GTCGCCATCG CCCAGGGCCG CCCGCCCGCC GCCGACGGCG AGATCGCGGT CGACCGGGTC ACCGCCCACC GCCACGACCT CGTCGCGGGC GGCCTGGTCT CCCTCGCCGA CGCGAACGGC CGCCCGATCC AGGTCGTCAT CAGCGGCATC ACCGAGCGCG GCGCCACCAG CGGTTCCCCC ACCGCCTCGA TCGGCCCCGA CCTCGCCGCG AAGGTCGACC CCGAGCCGGT CACCACCGCG CTCGCCGTCC GGGGCGGCGC GCTCGACGCC GTCGACCAGG CCGCAGGACC CACCGCCGTC ACCCGCACCG CCGCCACCGT CACCGCCGAG CGCGGCGACG CCACCGAGCT GTGGGTGATG CTCCTGCCGT TCAGCCTGCT CGCGCTCGCC ACCGCCGTGT TCGTCGCCTC GGCGACCTTC CGCGCCGTCT ACCTCCAGCG CCAGCGCACC ACCGCCCTGC TCCGCTGCCT CGGCGCGTTC CGGGGCCCGC TGCTCACCGC CAACCTGGTG GAGGCCCTGA TCAGCGGCGT CCTGGCCGGT CTCGTCGGCG CCCTGCTCTC CGGCCCGCTC GCCCGCGCGC TCGGCGCGGT GATGGACGGC GCCGGCCTGT CCGAGATGTT CGGCGCGGTC GACCTCGACC CCGCCGCCCT GCCCTCGCCC ACCTACCTGG TGATCGGCGT CGTCACCGCC GCCGTCCTCA GCGCCGTGGC CGCGCTGCGC CCGTCGCTGT CCGCCGCCCG CGTCGCCCCG CTGGCCGCCC TGCGCACGGC GGACGGCACG ATCGCCGTGC CGAGGCTGCG CAGGCGCCTG CTCGGCGGCG CGCTGCTCGT GGCCGCCGTC GCGCTCGGCG CGGGCGCGCT CGTGCTCCAG CAGTCCGCCG CGGCCGTCTT CCTGGTCTTC TTCTCGTCGA TGTGCGCCGC GACCGCCCTG TTCGGCGTGT TCGGCCCGGT GGTCGTGCCC GCCCTCAGCC GCGTCTTCGG CGCGGTCGCC ACCCGCCTCG GCGGACCGGC CGAGGCCAAG GCCCAGTGGA AGCTCGCCAC CGCCGAGGTC CGCCGCGTCC CGCAGCGCGC CGCCTCGGTC GCCCTGCCGC TGCTGCTCGC CTCGGCCATG GTCAGCTTCT TCGCCGTCAC CGCCGGCACC ACGCAGGCCG CCTTCGACGG GTTCGCCGAG GTCCGCCCGG ACGCCCAGGT CGCCGACACC GGCCGCAGGC CCCTGCCGGC CGAGGTCGTC ACCGCCGCAG AGGACCGCCC CGAGGTGAGC GCCAGCGTCC CGGTCGTCGT CACCGAGGGC GCCTGGGGCA CGACCGCCGA CGCGGCCAGG GCCACCGTCG TGCTCGCCGA CCCCACCCGG ATGCGCGACT GGCTCGCCGC CGAGGGCGTC ACCGCCGGGC TCGCCCCCGG CGACGTCCTG CTCGCCTCCC ACACCGCCCG GAACCTCGGC GTCCAGCGCG GCGACACCGT CACCCTGAAC GACCTGCCCG GAGGCCCCCG CACCGCCCGC TTCACCGACG TCGTCGACGG CGGCCTGCTC AACTACGCCG ACGCCGTCTT CGGCACCCCG GACCCCGAAG GGGTGACGCG GGTCCTCGTC TCGCTCCGGG ACGACGCCGA CCCGGCCGCC TACCGGACCG CCGTCACCGC CGCCCTGCCC GGCCACCCCA CCGTCGAGAC CACCACCGCC AGCGGCTGGG ACGCCGACGC CCAGGAGGCC CTGGACCAGG GCCTGACCCT CCTCATGCTG CTGATGGGCC TGTCCGTCGC GGTCGCCGTC ACCGGCATCG GCACCGCCCT CACCATCTCC GTGCAGGAGC GCCGCAAGGA GCTCGCGCTG CGCCGCGCAC TGGGCGTGAC CAGGGGCGGG CTGCTCGGCG GCGTCCTCGC CGAGGCCGTC CTGCTCGCCC TCACCGGGCT GCTCGGCGGC GGCCTGTTCG GCACCTTCTA CGCCGAACTG CTGCTCGCCG GCCTCGGCGT CCTGGTCTGG CCGTCGGCGG CCGTCGCCCC CCTGCTGATC GGCGGCTCCG CCGTGCTCGC GCTCGCCGTC CTGTCCGCGT TCGCCCCCGC CCGTTCGGCG GCCCGAATCC GCCCGGCGGC GGGCCTGTCC TCGGGGTGA
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Protein sequence | MPTSLRLAIA ELRAHPGRAV LPAVALLVGV ACLLATLLLS DAMARSAAEG ARALPTGTDL VVLPEPFSGG RLDQAMADRI AAVPGVREVV PERRVELDLL LDAGRATEER TVADVDPDGS VAIAQGRPPA ADGEIAVDRV TAHRHDLVAG GLVSLADANG RPIQVVISGI TERGATSGSP TASIGPDLAA KVDPEPVTTA LAVRGGALDA VDQAAGPTAV TRTAATVTAE RGDATELWVM LLPFSLLALA TAVFVASATF RAVYLQRQRT TALLRCLGAF RGPLLTANLV EALISGVLAG LVGALLSGPL ARALGAVMDG AGLSEMFGAV DLDPAALPSP TYLVIGVVTA AVLSAVAALR PSLSAARVAP LAALRTADGT IAVPRLRRRL LGGALLVAAV ALGAGALVLQ QSAAAVFLVF FSSMCAATAL FGVFGPVVVP ALSRVFGAVA TRLGGPAEAK AQWKLATAEV RRVPQRAASV ALPLLLASAM VSFFAVTAGT TQAAFDGFAE VRPDAQVADT GRRPLPAEVV TAAEDRPEVS ASVPVVVTEG AWGTTADAAR ATVVLADPTR MRDWLAAEGV TAGLAPGDVL LASHTARNLG VQRGDTVTLN DLPGGPRTAR FTDVVDGGLL NYADAVFGTP DPEGVTRVLV SLRDDADPAA YRTAVTAALP GHPTVETTTA SGWDADAQEA LDQGLTLLML LMGLSVAVAV TGIGTALTIS VQERRKELAL RRALGVTRGG LLGGVLAEAV LLALTGLLGG GLFGTFYAEL LLAGLGVLVW PSAAVAPLLI GGSAVLALAV LSAFAPARSA ARIRPAAGLS SG
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