Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2198 |
Symbol | |
ID | 8326387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 2432446 |
End bp | 2434215 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644942747 |
Product | cytochrome c oxidase, subunit I |
Protein accession | YP_003099988 |
Protein GI | 256376328 |
COG category | [C] Energy production and conversion |
COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.552552 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCGC TCAAGCCGGA ACCCGTGGTC GTCCGCCCCG GCGCGGGCGC GCGAGGGTCC AAGGGGTCGG TGCTGCTGGG GTTGCTGCGC ACCACCGATC CCAAGCGGAT CGGGCTGATG TACCTGGTGA CGTCGTTCTT CTTCTTCCTC GTCGGCGGCC TGATGGCCCT GCTCATGCGG GGCGAGTTGG CCCGTCCGGG GATGCAGTTC CTCTCCAACG AGCAGTACAA CCAGCTGTTC ACCATGCACG GGACGGTGAT GCTGCTGCTC TACGCCACCC CGATCGTGTT CGGCTTCGCC AACTACGTGC TGCCGCTGCA GATCGGCTCG CCGGACGTCG CGTTCCCCCG GCTCAACGCG CTCTCGTACT GGCTCTACCT GTTCGGCGCG ACGGTGACGG TCAGCTCGAT GCTCACCCCG GCCGGGGCTC CCGACTTCGG GTGGACCGCC TACACCCCGC TGTCGACGGC CGCGCACTCC CCCGGCGTCG GCGCGGATCT GTGGATCCTC GGGCTGGCGC TCGGCGGGGT CGGCACGATC CTGGGCGCGG TCAACATGAT CACCACCGTG GTGTGCCTGC GCGCGCCAGG CATGACCATG TGGCGGTTGC CGATCTTCAC CTGGAACATC CTGGTCACCA GCGTGCTGAT CCTGCTGGCG TTCCCGATCC TGACCGCGGC GCTGCTCGCG CTCGCCGCCG ACCGGCACCT CGGCGCGCAC GTGTTCGACC CGGCCAACGG CGGCGTGATC CTGTGGCAGC ACCTGTTCTG GTTCTTCGGC CACCCCGAGG TGTACATCAT CGCGCTGCCG TTCTTCGGCA TCGTCACCGA GGTGTTCCCG GTGTTCAGCC GCAAGCCCCT GTTCGGGTAC AAGGGCCTGG TGTTCGCCAC GCTCGCGATC GCCGCCCTGT CGGTGGCGGT GTGGGCGCAC CACATGTTCG CGACCGGCGC GGTGCTGCTG CCGTTCTTCT CGCTGATGAC GTTCCTGATC GCGGTGCCGA CCGGCATCAA GTTCTTCAAC TGGATCGGCA CGATGTGGAA GGGGCAGCTC ACGTTCGAGT CGCCCATGCT GTTCTCGATC GGGTTCCTGG TGACGTTCCT GTTCGGCGGC CTGTCCGGCA TCCTGCTCGC GTCGCCGCCG ATCGACTTCC ACGTGCACGA CACGTACTTC GTCGTCGCCC ACTTCCACTA CGTCCTGTTC GGCACGATCG TGTTCGCCAC CTTCGCCGGG ATCTACTTCT GGTTCCCCAA GATGACCGGC CGGATGCTGG ACGAGGGCCT GGGCAAGCTG CACTTCTGGA CCACGTTCCT GGGCTTCCAC GCCACGTTCC TGGTGCACCA CTGGCTGGGC AACGAGGGGA TGCCGCGCCG GTACGCCGAC TACCTGCCGT CGGACGGGTT CACCTTCCTG AACACGCTGT CCACGATCGG GTCGTTCGTG CTGGGCGCGT CGGTGCTGCC GTTCGTGTGG AACGTGGTGC GCAGCCACCG CTACGGCGAG CTCGCGGGCG TGGACGACCC GTGGGGGTTC GGCAACTCGC TGGAGTGGGC CACCTCGTCG CCGCCGCCCA GGCACAACTT CACCGAGCTG CCGCGCATCC GCAGCGAGCG GCCCGCGTTC GAGCTGCACC ACCCGCACAT GGTCGACCGG ATGCGGGCGG AGGCGCACTT CTCGCTGCGC AGGGGCGGGG AGTCGACCCC GCCGGACCCG ACGACCGAGC AGGCGCTCGC GCCGACCGAC CGCAACCGGA AGAGCCCCTC GGACGAGTGA
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Protein sequence | MTALKPEPVV VRPGAGARGS KGSVLLGLLR TTDPKRIGLM YLVTSFFFFL VGGLMALLMR GELARPGMQF LSNEQYNQLF TMHGTVMLLL YATPIVFGFA NYVLPLQIGS PDVAFPRLNA LSYWLYLFGA TVTVSSMLTP AGAPDFGWTA YTPLSTAAHS PGVGADLWIL GLALGGVGTI LGAVNMITTV VCLRAPGMTM WRLPIFTWNI LVTSVLILLA FPILTAALLA LAADRHLGAH VFDPANGGVI LWQHLFWFFG HPEVYIIALP FFGIVTEVFP VFSRKPLFGY KGLVFATLAI AALSVAVWAH HMFATGAVLL PFFSLMTFLI AVPTGIKFFN WIGTMWKGQL TFESPMLFSI GFLVTFLFGG LSGILLASPP IDFHVHDTYF VVAHFHYVLF GTIVFATFAG IYFWFPKMTG RMLDEGLGKL HFWTTFLGFH ATFLVHHWLG NEGMPRRYAD YLPSDGFTFL NTLSTIGSFV LGASVLPFVW NVVRSHRYGE LAGVDDPWGF GNSLEWATSS PPPRHNFTEL PRIRSERPAF ELHHPHMVDR MRAEAHFSLR RGGESTPPDP TTEQALAPTD RNRKSPSDE
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