| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1890 |
|---|
| Symbol | |
|---|
| ID | 8326075 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 2097267 |
|---|
| End bp | 2100581 |
|---|
| Gene Length | 3315 bp |
|---|
| Protein Length | 1104 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644942439 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003099684 |
|---|
| Protein GI | 256376024 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGCACCA CGGGGGACGA GTCCGGGGAG TTCCAGATCC CCTCGGCCAA GCGCGCTCAC
GTGCACGTGA GACGCGGCGG GCGCACCCGC CCCGAGGTGG TGGTGCGGCC GGACGCGGCG
GTCGACCGGG CCGACGTGCG CGGCGAGCTG TCCAGCGGCG CGCGCTGGTC GCTCGTGACG
ACCGACTCGA CCACCGCGCC CGGCGCGGCC AAGGCGAACG GCAGCGAGCC CGAGCTGGCC
GCCGCCGCGA ACGCCCACCT CGACGGCTCC CCCACCCCGC TGGGCGCGGC GGCCGTGCTG
CGGCTGCTGC TGCACCAGGA GCACCCGCGC GCGTCCGGGG TCGTGGACGC CTGGGTGGCG
GCGCACGGGC TGGTGTTCGC GGCGCGGGCG GTCGCCGAGC TGGCGCGGGT GGAGGTGGTG
CTCCACAAGC TCTCCGACAG CTACAAGCCC CGCTGGACCC TGCGCCACCG CGCGCCGACC
GCGCGGAGCG TCCCCCCGGA GGAGATCGCG CTGATGCGGC GGGCGCGCGA GCTGCTCGCG
GTGTGCCCCG AGGCGGAGCA CGCCGAGGTG GTCGCGGCGC TGGCGCGGTC GCGGGACACC
GCGCAGGGCA GGCTGGCGGT CAGCTACCTG GTCCCCGGCG AGCGGGGGTG GGCGGACGAG
GTGGTCACCG AGACCCTCGG CGGCCCGATG TACTCCTCGG ACAGCTTCCT GCTGCTGACC
TCGGTGGGCG AGGCCGACCA GCTGATCCGC CTGATGTCCC TCGGCTGGGT GATGTGGTAC
CTGCCGTCCC CCGAGGTGCT GTGGACCGCG CTGGACGCGC TGGGCCACGG CGTGCTGCCC
GTGCTGGGCC GCCTGCTCGA CGTCGAGCAG CTGTCCGCGC AGGAGCACGG CCACGCGCTG
GAGGTGCTGG CGGAGCTGCC CGGTGACGAG GCGTTCGCGC TGCTGCTCCC CCGGTTCGCG
CTGCGCCCGG TGCGCCTGGC CGCGCACTCG ATGGCCGCGC GCGACCCGGA GCGGGCGCTG
CGGCTGCTGG CCGCCGCGGC CGTGGGCAGG CCGGCGACCT CGGACGTGGC GAAGGTGCTG
CGCGCCGTCG CGGTCAAGTT CGCCGACCTG GACGTGAGCG GCCTGCCCGA GGCGACCAGG
ACCGTGCTGG AGCGGGAGCG GGCCGCGCAC CGGGCCGTTC CCGCGTCCGC CGAGGGCGCG
CCGCCCGTGC TGACCTCGCC GCCGTGGGCG AAGGAGCGCA GGAGGGCCGC GAGGCCGAAG
GTCGTGAAGG GCCTGGAACC GCTGGCCGCG CCGGGGCTGG TGTGGGAGCC GGGCGAGTTC
GAGGCGTGGC GCTCGGAGCA CTTCCGCCCG CGCCGCTTCC CGGACTGGGA GGCGACGGTG
CGGGCCTACG TCGCCGGTCG GCTGCGCTCG CACTACGACC ACCCGGCGAT GTTCCTGCAC
GCCGCCGAGC GCCTGGTCCG ACCGCTGCTG GCGGACTGGA AGCCGGACCC GTGGGCGGCG
GAGCGGTGGG GCAGGCCGCT GATCGCCCGG TTCGGGCTGG ACGTGCTGCC GCAGGTCGTG
GCGCTGGCCA GGTCCCGGCC GGGCGCGCTG GCGGAGCTGG TGCTGCCGTA CGCGGCTCCC
GAGGTCGCGG CGCTGGTCGC GGACTGGTTG GTGCGGGTGC GGTCCGCGCG GCCGGTGGCG
CGGCGCTGGT TGGAGCGGCA CGGGGTGGAC GCGGCCCGGT TCCTGGCGCC GGTGGCGGTC
GGCCCGGCCG GGACCGCTCG GCGGGCGGCC GAGAACGCGC TGCGGCAGAT CCCCGAGCAC
GCCATGACCG CCGCGCGCGA GCACGGCGAG CAGGTCGCCG CGATCGTGGC CGCGTCGCTG
GCGATGGACC CGCTGGACGT GCTGCCGGTG AGGATCCCGG CCGTCCCGTC CTGGCTGGAC
CCGGACCTGC TGCCGCAGGT GCTGCTGCGC GGCGGACGGG CGGCGCTGCC GGAGGAGGCG
GCGCGGAACC TGCTGGTGGC GCTGGCGATG TCCACTCCGG ACGAGCCGTA CGCGGGGCTG
GAGCAGGTGC GGCGGGCGTG CGACCCGACG TCGCTGGCCC GGTTCGCCTG GGCGGTGTTC
GACCAGTGGC GGCTCGCCGG GACGCCGTCC AAGGACGGGT GGGCGCTCAC CTGCCTCGGC
CTGGTCGGCG ACGACGAGGT GGTGCGCGCG CTGAGCCCGC AGCTGCGGTC GTGGCCCGCC
GAGGGCGGGC ACGCCAGGGC GGTGCTCGGG CTGGACGTGC TGGCGCGGCT GGGCACGGAC
GTGGCGCTGG TGCACCTGGA CGACGTGGCG CGGCGGGTCA GGCACAAGGG CGTGCGGACC
AGGGCGCAGG AGAAGCTGGC CGAGGTCGCG ACCTCGCTGG GGCTGACCTC CGACGAGCTG
TCCGACCGGC TGGTGCCGAC GTTCGACCTG GCCCCGGACG GCACGCTGGA GCTGGACTAC
GGGCCGAGGC GGTTCACGGT CGGGTTCGAC GAGCAGCTCA CCCCGCACGT GACCGGTCCG
GACGGCAAGC GGCTCAAGTC CCTGCCCAAG CCCGGCGCGC GCGACGACGC GGAGCTGGCC
CCCGAGGCGC ACCGGCGGTT CGCGGCGCTG AAGAAGGACG TGCGCACCGC GGCGACCGCG
CAGATCGCCC GGTTGGAGCA GGCGATGCTG GCGGGCCGGT CGTGGAGCGC GGAGGAGTTC
ACCGCGCTGT TCGCGCACCA CCCGCTGGTG TGGCACCTGG CCCGCAGGCT GGTGTGGATC
ACCGAGTCGG GACTGGCGTT CCGGCTCGCC GAGGACCGCA CGCTCGGCGA CCTGAACGAG
GACCCGGTGG AGCTGGGCGC GGGCGAGCGG GTGGCGCTGG CCCACCCGAT GCGGCTCGGC
GACGACCTGG AGGCGTGGGC GGAGCTGCTG GCCGACTACG AGGTGCTGCA ACCGTTCCCG
CAGCTCGGCA GGCCCGTGCA CCGGCTCACC GCCGAGGAGG CGGAGGCGTT CCGGCTGACC
AGGTTCCAGG GGGCCGTGGT GCCGTCCGGG AAGGTGTTCG GGCTGCTGAA CAAGGGCTGG
GACCAGGAGC AGTCGGACGG CGGTGCGATC GGCTGGGTGC AGCGACCGCT GCCGGACGGG
CGCGCGGTCG TGGTCGGCCT GGACCCCGGC GTGCCGCTCG GGTACGACCA CTCCGGCGTC
GACCAGAAGA CCACCGAGGT GTGGATCACC GACCACGGGC CGGGGTCGTG GCGGGCGGAG
AGGCACCGGT TCGGGACGGT CGACCCGGTG GTGATGTCCG AGGTGCTGGG CGACCTGGCC
GGCCTGACCC GCTGA
|
|---|
| Protein sequence | MRTTGDESGE FQIPSAKRAH VHVRRGGRTR PEVVVRPDAA VDRADVRGEL SSGARWSLVT
TDSTTAPGAA KANGSEPELA AAANAHLDGS PTPLGAAAVL RLLLHQEHPR ASGVVDAWVA
AHGLVFAARA VAELARVEVV LHKLSDSYKP RWTLRHRAPT ARSVPPEEIA LMRRARELLA
VCPEAEHAEV VAALARSRDT AQGRLAVSYL VPGERGWADE VVTETLGGPM YSSDSFLLLT
SVGEADQLIR LMSLGWVMWY LPSPEVLWTA LDALGHGVLP VLGRLLDVEQ LSAQEHGHAL
EVLAELPGDE AFALLLPRFA LRPVRLAAHS MAARDPERAL RLLAAAAVGR PATSDVAKVL
RAVAVKFADL DVSGLPEATR TVLERERAAH RAVPASAEGA PPVLTSPPWA KERRRAARPK
VVKGLEPLAA PGLVWEPGEF EAWRSEHFRP RRFPDWEATV RAYVAGRLRS HYDHPAMFLH
AAERLVRPLL ADWKPDPWAA ERWGRPLIAR FGLDVLPQVV ALARSRPGAL AELVLPYAAP
EVAALVADWL VRVRSARPVA RRWLERHGVD AARFLAPVAV GPAGTARRAA ENALRQIPEH
AMTAAREHGE QVAAIVAASL AMDPLDVLPV RIPAVPSWLD PDLLPQVLLR GGRAALPEEA
ARNLLVALAM STPDEPYAGL EQVRRACDPT SLARFAWAVF DQWRLAGTPS KDGWALTCLG
LVGDDEVVRA LSPQLRSWPA EGGHARAVLG LDVLARLGTD VALVHLDDVA RRVRHKGVRT
RAQEKLAEVA TSLGLTSDEL SDRLVPTFDL APDGTLELDY GPRRFTVGFD EQLTPHVTGP
DGKRLKSLPK PGARDDAELA PEAHRRFAAL KKDVRTAATA QIARLEQAML AGRSWSAEEF
TALFAHHPLV WHLARRLVWI TESGLAFRLA EDRTLGDLNE DPVELGAGER VALAHPMRLG
DDLEAWAELL ADYEVLQPFP QLGRPVHRLT AEEAEAFRLT RFQGAVVPSG KVFGLLNKGW
DQEQSDGGAI GWVQRPLPDG RAVVVGLDPG VPLGYDHSGV DQKTTEVWIT DHGPGSWRAE
RHRFGTVDPV VMSEVLGDLA GLTR
|
|---|
| |