| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1787 |
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| Symbol | |
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| ID | 8325972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 1963509 |
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| End bp | 1964327 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644942336 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003099581 |
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| Protein GI | 256375921 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.218781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGGAGA AGCGTCCCGG TTTCGCGGTC TACGGACCGC TGATCGCGTT CATCATCGCG
TCGGCCTTCC CGTTCTACTG GGCCTTCCTG GTCGGCAGCC ACGACGACCA GCACTTCAAG
GCCGAGCAGC CCTGGCTGCC CGGCGGCAAC TTCCTGGTCA ACGCCAAGGA CGTCCTCGAC
AAGGTCGAGT TCTGGAAGGC GCTGGGCAAC AGCCTCATCG TCTCCGGCAC GGTCACCGTC
TCGGTCGTGG TGCTGTCCAG CCTCGCCGGC TTCGCCTTCG CCAAGCTGCG CTTCAAGGGC
CGGGGCCCGC TGCTGGTGTT CGTCGTCGCG ACCCTGGCGG TGCCGACCCA GCTGGGCATC
ATCCCGCTGT ACATGGCGAT GGCCGAGTTC GGCTGGGCCG GTGAGCTGGG CGCGGTGATC
GTGCCGAACC TGATCACCGC CTTCGGCGTG TTCTGGATGC GCCAGTTCAT CGCGGACGCC
GTGCCGGACG AGCTCGTCGA AGCGGCCCGC ATGGACGGTT GCAGCCTCCT CAGCACCTAC
TGGCACGTGT GCCTGCCCGC GGTCCGCCCG GCGGCGGCGA TGCTCGGCAT CTTCACGTTC
ATGACGTCCT GGAACGACTT CCTCTGGCCG CTGATCGCGC TGAACGCCGA GAACCCGACC
ATCCAGGTCG CGCTGGAGAA GCTCAAGAGC GGTTACTACG TCAACAACTC GCTCGTGCTC
GCCGGGACCA CGATGGCCAC CATCCCGGTG CTGATCGTGT TCCTCGTACT CGGGCGGCAG
ATCGTCGCCG GGATCATGCA GGGTGCTGTG AAGGGGTAG
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| Protein sequence | MSEKRPGFAV YGPLIAFIIA SAFPFYWAFL VGSHDDQHFK AEQPWLPGGN FLVNAKDVLD
KVEFWKALGN SLIVSGTVTV SVVVLSSLAG FAFAKLRFKG RGPLLVFVVA TLAVPTQLGI
IPLYMAMAEF GWAGELGAVI VPNLITAFGV FWMRQFIADA VPDELVEAAR MDGCSLLSTY
WHVCLPAVRP AAAMLGIFTF MTSWNDFLWP LIALNAENPT IQVALEKLKS GYYVNNSLVL
AGTTMATIPV LIVFLVLGRQ IVAGIMQGAV KG
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