| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1704 |
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| Symbol | |
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| ID | 8325889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 1862025 |
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| End bp | 1862888 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644942254 |
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| Product | spermidine synthase-like protein |
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| Protein accession | YP_003099499 |
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| Protein GI | 256375839 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.406029 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGCAGAG CGCGCAGGAC CGACGACACC ATCACCAGGG AGGTCGACTC GGGCATCGCC
GAACTCGTCC CCGACCCCTA CTACGACAAC GGGTGGACGC TGCTCCTCAA CGGCACCCCG
CAGTCGCACG TGGACCTGGA CGACCCGGCG AACCTGGTGT TCGAGTACGT GCGCCGGATC
GCCCACCTGG CGGACCTGCT GGCCGACGAG GGCGAGCCGC TGCGCGCGGT CCACCTGGGC
GGCGGCGCGA TGAGCCTGCC GAGGTACATC GCCGCGACCA GGCCGGGGTC GTCGCAGCAG
GTCGTGGAGA TCGACGAGGC GCTCGTGGAC CTGGTGCGCG GGGTCCTGCC GCTGCGCCGG
GACTGGCGGG TGCGGGTGCG GCGGGGCGAC GCGCGCGCGG TGCTGGCGAA GGCCCCGGAG
GACACCTTCG ACCTGATCGT GACCGACGCC TTCGCGGGCG CCCGCACCCC GGCGCACCTG
ACCTCGCGCG AGTACGTGGA GCTGGCCGCG CGGGCGCTGA ACGCGCGGGG CGTGTACAGC
TCGAACATCG GCGACGGCGG CGACCGGGCG TTCGCGCGGG GCCAGATCGC GACGATCAGG
TCGGTGTTCC GCAACGTCTG CGTGATCGCC GAGCCCGCGG TGTTCAAGGG CAGGCGCTTC
GGCAACTTCG TGATCGCCGC GTCGAACCAG GACCTCCCCC TGGCCGAGCT GATCCGCAGG
ACGGCGGGCG ACCCGTTCCC CGGCCAGGTG GAGCACGGCG AGTCCCTGAC CCGCTTCACC
GGCGGCGCGA GGCCGGTGAC GGACGAGACG GCGACCCGGT CGCCGGAACC GCCGCAGGGG
ACCTGGGGGA TCTCGGAGGA CTGA
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| Protein sequence | MGRARRTDDT ITREVDSGIA ELVPDPYYDN GWTLLLNGTP QSHVDLDDPA NLVFEYVRRI
AHLADLLADE GEPLRAVHLG GGAMSLPRYI AATRPGSSQQ VVEIDEALVD LVRGVLPLRR
DWRVRVRRGD ARAVLAKAPE DTFDLIVTDA FAGARTPAHL TSREYVELAA RALNARGVYS
SNIGDGGDRA FARGQIATIR SVFRNVCVIA EPAVFKGRRF GNFVIAASNQ DLPLAELIRR
TAGDPFPGQV EHGESLTRFT GGARPVTDET ATRSPEPPQG TWGISED
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